RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 HOXC13P31276 330 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 CASP2P42575 452 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 FAM189BP81408 668 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 SMAD3P84022 425 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 B3GNT6Q6ZMB0 384 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 PIWIL4Q7Z3Z4 852 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 PGBD5Q8N414 524 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 PCDH20Q8N6Y1 951 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 KYQ8NBH2 561 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 OR4L1Q8NH43 312 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 DGCR14Q96DF8 476 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 GPR63Q9BZJ6 419 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 AGO1Q9UL18 857 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 NEU3Q9UQ49 428 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 TSC22D4Q9Y3Q8 395 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 FGF1P05230 155 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 JUNP05412 331 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 ANPEPP15144 967 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 ITGB6P18564 788 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 SOX11P35716 441 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 RHOAP61586 193 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 DMPKQ09013 629 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 CDC16Q13042 620 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 NADSYN1Q6IA69 706 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.322e-35■■■■□ 22.7
VEGFA-205ENST00000372067 CLEC14AQ86T13 490 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 PTGR2Q8N8N7 351 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 NPAS2Q99743 824 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 MUSKO15146 869 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 SNAP91O60641 907 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 FKTNO75072 461 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 TFPTP0C1Z6 253 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 SLAIN1Q8ND83 568 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 TSEN34Q9BSV6 310 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 VTI1BQ9UEU0 232 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 RNF112Q9ULX5 631 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 RPL26L1Q9UNX3 145 aaKnown RBP17.05■□□□□ 0.32
VEGFA-205ENST00000372067 FADS3Q9Y5Q0 445 aa17.05■□□□□ 0.32
VEGFA-205ENST00000372067 F8W8V4 182 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 SLCO1B7G3V0H7 640 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 MATN2O00339 956 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 TBL1XO60907 577 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 IPO13O94829 963 aaKnown RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CKMP06732 381 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CTPS1P17812 591 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 FGFR3P22607 806 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 SLC6A4P31645 630 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 PRKAA2P54646 552 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 SH3BGRP55822 239 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 KIAA0408Q6ZU52 694 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CUZD1Q86UP6 607 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CILP2Q8IUL8 1156 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 ANKRD49Q8WVL7 239 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 PRICKLE1Q96MT3 831 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 RBM38Q9H0Z9 239 aaKnown RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 TREX1Q9NSU2 369 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 MTF2Q9Y483 593 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 PFDN6O15212 129 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 IGHA2P01877 340 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 SMIM18P0DKX4 95 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 ARSAP15289 507 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 ATF6P18850 670 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 MAPKAPK2P49137 400 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 DSG1Q02413 1049 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 GRM2Q14416 872 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 C16orf89Q6UX73 402 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 GK5Q6ZS86 529 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 DDI1Q8WTU0 396 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 ATP6V1E2Q96A05 226 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 MID1IP1Q9NPA3 183 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CDH22Q9UJ99 828 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 PDCD11Q14690 1871 aaKnown RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 A8MT66 165 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 ZBBXA8MT70 800 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 SLC7A4O43246 635 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 COCHO43405 550 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 PRAMEF11O60813 436 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 NDST3O95803 873 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 C1RP00736 705 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CDKN2DP55273 166 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CBLBQ13191 982 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 PTPRNQ16849 979 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 FAM219BQ5XKK7 198 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 BNC2Q6ZN30 1099 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 CCDC126Q96EE4 140 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 MRPL1Q9BYD6 325 aaKnown RBP17.04■□□□□ 0.32
VEGFA-205ENST00000372067 ZNF212Q9UDV6 495 aa17.04■□□□□ 0.32
VEGFA-205ENST00000372067 RGSL1A5PLK6 1076 aa17.03■□□□□ 0.32
VEGFA-205ENST00000372067 UBDO15205 165 aa17.03■□□□□ 0.32
VEGFA-205ENST00000372067 RPP40O75818 363 aaKnown RBP17.03■□□□□ 0.32
VEGFA-205ENST00000372067 SIX3O95343 332 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-205ENST00000372067 ITGAXP20702 1163 aa17.03■□□□□ 0.32
VEGFA-205ENST00000372067 KCNA5P22460 613 aa17.03■□□□□ 0.32
VEGFA-205ENST00000372067 PPARGP37231 505 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-205ENST00000372067 NEK2P51955 445 aa17.03■□□□□ 0.32
VEGFA-205ENST00000372067 FLOT2Q14254 428 aa17.03■□□□□ 0.32
VEGFA-205ENST00000372067 FAM209AQ5JX71 171 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms