RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SCUBE3Q8IX30 993 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 TCEAL8Q8IYN2 117 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 TNIP2Q8NFZ5 429 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ING5Q8WYH8 240 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 NELL1Q92832 810 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ZUFSPQ96AP4 578 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 KIF12Q96FN5 646 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 TSGA13Q96PP4 275 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SLC2A13Q96QE2 648 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 LGMNQ99538 433 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MRPL45Q9BRJ2 306 aaKnown RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 OXCT2Q9BYC2 517 aaPredicted RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 MRPL1Q9BYD6 325 aaKnown RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 NUF2Q9BZD4 464 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SHCBP1LQ9BZQ2 653 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MUC13Q9H3R2 512 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 PLGRKTQ9HBL7 147 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 DNAAF2Q9NVR5 837 aaKnown RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 GDAP2Q9NXN4 497 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 KLHL8Q9P2G9 620 aaPredicted RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 FBXO4Q9UKT5 387 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MYRFQ9Y2G1 1151 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MRPS23Q9Y3D9 190 aaKnown RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 AP4S1Q9Y587 144 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 TICRRQ7Z2Z1 1910 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 HEATR9A2RTY3 570 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 BBIP1A8MTZ0 92 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SDHDO14521 159 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SYN3O14994 580 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 XPOTO43592 962 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 RNASEH2AO75792 299 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 SEC24AO95486 1093 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 STAMBPO95630 424 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 LTFP02788 710 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 PYGLP06737 847 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SBK3P0C264 359 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ENO3P13929 434 aaPredicted RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 CEBPBP17676 345 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 PTPN2P17706 415 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 CD72P21854 359 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 FCARP24071 287 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SLC5A2P31639 672 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 RPL9P32969 192 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 MAGEA8P43361 318 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ADARP55265 1226 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 PSME3P61289 254 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 CRADDP78560 199 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 CDKL1Q00532 357 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 CDH17Q12864 832 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SPIDRQ14159 915 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 PRPSAP1Q14558 356 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 UBXN2BQ14CS0 331 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 INTS11Q5TA45 600 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 TANGO2Q6ICL3 276 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 LRRC8EQ6NSJ5 796 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 PPP4R4Q6NUP7 873 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 C8orf82Q6P1X6 216 aaPredicted RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 DPH6Q7L8W6 267 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ZNF687Q8N1G0 1237 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 BBS5Q8N3I7 341 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 C12orf29Q8N999 325 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 KDM1BQ8NB78 822 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 OR52K1Q8NGK4 314 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ZNF420Q8TAQ5 688 aaPredicted RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 FNDC8Q8TC99 324 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ELSPBP1Q96BH3 223 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 PGAP3Q96FM1 320 aaPredicted RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 CNDP2Q96KP4 475 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 KLHL32Q96NJ5 620 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 CYP2S1Q96SQ9 504 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 NELL2Q99435 816 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 CCT7Q99832 543 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ZCWPW1Q9H0M4 648 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 SLC38A7Q9NVC3 462 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ARMC1Q9NVT9 282 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 NCKIPSDQ9NZQ3 722 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 UBQLN1Q9UMX0 589 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 RNF11Q9Y3C5 154 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 NME7Q9Y5B8 376 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
USF1-201ENST00000368019 COPG1Q9Y678 874 aaKnown RBP11.53□□□□□ -0.56
USF1-201ENST00000368019 A0A087WXM4 84 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 CCDC160A6NGH7 325 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 AQP12BA6NM10 295 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 EEF2KO00418 725 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 NRG2O14511 850 aaPredicted RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 HNRNPRO43390 633 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 LILRB5O75023 590 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 CHRNGP07510 517 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 BMP2P12643 396 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms