RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 TRAFD1O14545 582 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 CCND3P30281 292 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 AKT2P31751 481 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 WASP42768 502 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 GPD2P43304 727 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 LINGO4Q6UY18 593 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SPATA19Q7Z5L4 167 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 C10orf107Q8IVU9 208 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PANX1Q96RD7 426 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 STMN3Q9NZ72 180 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 NDRG2Q9UN36 371 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 RGPD5Q99666 1765 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SMNDC1O75940 238 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PRAMEF1O95521 474 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SERPINA6P08185 405 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 RPL17P18621 184 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 CMPK1P30085 196 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SEC13P55735 322 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 DSC2Q02487 901 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 GBE1Q04446 702 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 GCNT7Q6ZNI0 430 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 KIAA0408Q6ZU52 694 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 BHLHE22Q8NFJ8 381 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 NEK6Q9HC98 313 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 CNTN3Q9P232 1028 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 HLA-DQA2P01906 255 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ALPPL2P10696 532 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SSR2P43308 183 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TNK2Q07912 1038 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ILF3Q12906 894 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 USP4Q13107 963 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 INAQ16352 499 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ZNF792Q3KQV3 632 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 LDLRAP1Q5SW96 308 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 HGSNATQ68CP4 663 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 NEK10Q6ZWH5 1172 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 KIAA2013Q8IYS2 634 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 FLCNQ8NFG4 579 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 OR4A15Q8NGL6 344 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 WRAP53Q9BUR4 548 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TCAF1Q9Y4C2 921 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SNED1Q8TER0 1413 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SRRM3A6NNA2 597 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ATP6V1G2O95670 118 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 LINC00032P0C843 101 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 COX4I1P13073 169 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 BST1Q10588 318 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 HNRNPDQ14103 355 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 DHRSXQ8N5I4 330 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 NUDT4Q9NZJ9 180 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SUCOQ9UBS9 1254 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 A0A0U1RQJ8 604 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 RFXANKO14593 260 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PDE5AO76074 875 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PSMB9P28065 219 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 CRHR1P34998 444 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SNX30Q5VWJ9 437 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TAF8Q7Z7C8 310 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TMPRSS11BQ86T26 416 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 LRRN4CLQ8ND94 238 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TEKT5Q96M29 485 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 LRP6O75581 1613 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ERAL1O75616 437 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 FSHRP23945 695 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 BLKP51451 505 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SP2Q02086 613 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 CTU1Q7Z7A3 348 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PARGQ86W56 976 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 NETO2Q8NC67 525 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 OR7D4Q8NG98 312 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 MARK4Q96L34 752 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 EXD2Q9NVH0 621 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 A0A0U1RQF3 1178 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 TGDSO95455 350 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 HNRNPCP07910 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ASMTP46597 345 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 MANFP55145 182 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 RNF148Q8N7C7 305 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 FBXO30Q8TB52 745 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 ZSCAN18Q8TBC5 510 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 SLC38A2Q96QD8 506 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 OR52E6Q96RD3 313 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PCBD2Q9H0N5 130 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 UNC93B1Q9H1C4 597 aa10.31□□□□□ -0.76
SPTAN1-201ENST00000358161 PCSK2P16519 638 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 GSTM5P46439 218 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 TTMPQ5BVD1 217 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 SNAP47Q5SQN1 464 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 FOXR1Q6PIV2 292 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 SPATA6LQ8N4H0 392 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 ZNF248Q8NDW4 579 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 NPLOC4Q8TAT6 608 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 ZNF384Q8TF68 577 aa10.3□□□□□ -0.76
SPTAN1-201ENST00000358161 SLC44A1Q8WWI5 657 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms