RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RNASEH2AO75792 299 aaKnown RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 SRP72O76094 671 aaKnown RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 SIX3O95343 332 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 ALDH1A1P00352 501 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 CR2P20023 1033 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 PFKFB4Q16877 469 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 SAMD4BQ5PRF9 694 aaKnown RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 FAM219BQ5XKK7 198 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 IL31Q6EBC2 164 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 GALNT15Q8N3T1 639 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 GIPC2Q8TF65 315 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 CINPQ9BW66 212 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 MID1IP1Q9NPA3 183 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 SPO11Q9Y5K1 396 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 ACTL7AQ9Y615 435 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 AP4B1Q9Y6B7 739 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 MT-CO1P00395 513 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 LRRC8DQ7L1W4 858 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 PHYKPLQ8IUZ5 450 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 TWIST2Q8WVJ9 160 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 NSMCE3Q96MG7 304 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 TCF12Q99081 682 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 PCDHAC1Q9H158 963 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 ARIH1Q9Y4X5 557 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 PCDHB7Q9Y5E2 793 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 ZFP37Q9Y6Q3 630 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-201ENST00000351487 LCHNA4D1U4 455 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 KDELR3O43731 214 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 PABPC4LP0CB38 370 aaKnown RBP22.06■■□□□ 1.12
UPF3A-201ENST00000351487 ATP5C1P36542 298 aaKnown RBP22.06■■□□□ 1.12
UPF3A-201ENST00000351487 GRIA2P42262 883 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 RGRP47804 291 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 TAF1AQ15573 450 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-201ENST00000351487 EML3Q32P44 896 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 SETMARQ53H47 684 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-201ENST00000351487 IL23RQ5VWK5 629 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 ANKS3Q6ZW76 656 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 STAG3L4Q8TBR4 150 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 ATP6V1E2Q96A05 226 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 TSEN34Q9BSV6 310 aaKnown RBP22.06■■□□□ 1.12
UPF3A-201ENST00000351487 TAS2R13Q9NYV9 303 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 TCRBV3S1A0A5B6 114 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 ENPP3O14638 875 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 SLC11A2P49281 568 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 GATMP50440 423 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 ATP6V0D1P61421 351 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 RALGDSQ12967 914 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 C6orf10Q5SRN2 563 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 SNX31Q8N9S9 440 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 SPDYE1Q8NFV5 336 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-201ENST00000351487 ZFAND2BQ8WV99 257 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 CEP295NLQ96MC4 621 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 SPATA16Q9BXB7 569 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 AP4S1Q9Y587 144 aa22.06■■□□□ 1.12
UPF3A-201ENST00000351487 TANC1Q9C0D5 1861 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 LRRC14BA6NHZ5 514 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 PPP6CO00743 305 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 PIP5K1BO14986 540 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 INSIG1O15503 277 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 RHOBTB1O94844 696 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 PRSS56P0CW18 603 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 GFAPP14136 432 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 OXCT1P55809 520 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 IRAK1BP1Q5VVH5 260 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 NAIF1Q69YI7 327 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-201ENST00000351487 GLT6D1Q7Z4J2 308 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 PCYOX1LQ8NBM8 494 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 PRICKLE1Q96MT3 831 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-201ENST00000351487 NSUN5Q96P11 429 aaKnown RBP22.05■■□□□ 1.12
UPF3A-201ENST00000351487 TDRD1Q9BXT4 1180 aaKnown RBP22.05■■□□□ 1.12
UPF3A-201ENST00000351487 HCSTQ9UBK5 93 aa22.05■■□□□ 1.12
UPF3A-201ENST00000351487 A0A1W2PQ45 241 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 A0A1W2PQY0 241 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 UBA6A0AVT1 1052 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 CLASP2O75122 1294 aaKnown RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 PRLP01236 227 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 SMIM18P0DKX4 95 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 FOXA1P55317 472 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 LCP2Q13094 533 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 PAQR3Q6TCH7 311 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 OR4K2Q8NGD2 314 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 CYP2S1Q96SQ9 504 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 UBAP1Q9NZ09 502 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 OAS3Q9Y6K5 1087 aaKnown RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 A0A0J9YYE9 177 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 H0YJX3 145 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 CLDN11O75508 207 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 SELPP16109 830 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 NAA20P61599 178 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 RPS24P62847 133 aaKnown RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 THEMIS2Q5TEJ8 643 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 KLHDC10Q6PID8 442 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 RETREG3Q86VR2 466 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 MFN1Q8IWA4 741 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 MDGA1Q8NFP4 955 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 NCSTNQ92542 709 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 UHRF1Q96T88 793 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 GPATCH1Q9BRR8 931 aaKnown RBP22.04■■□□□ 1.12
UPF3A-201ENST00000351487 TTPALQ9BTX7 342 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 CCDC68Q9H2F9 335 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms