RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TTC8Q8TAM2 541 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CYB5D2Q8WUJ1 264 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 LPGAT1Q92604 370 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ESAMQ96AP7 390 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 RSPRY1Q96DX4 576 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CLPTM1LQ96KA5 538 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MARK4Q96L34 752 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MRPL57Q9BQC6 102 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 C2orf49Q9BVC5 232 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 BOCQ9BWV1 1114 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 BBS2Q9BXC9 721 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ADGRE3Q9BY15 652 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 DRC3Q9H069 523 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CDH19Q9H159 772 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 LRMDAQ9H2I8 198 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CD248Q9HCU0 757 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SAR1AQ9NR31 198 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ARHGAP26Q9UNA1 814 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 L3MBTL1Q9Y468 752 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ARIH1Q9Y4X5 557 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 OTOL1A6NHN0 477 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 A8MT66 165 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MEI4A8MW99 385 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GAPDHSO14556 408 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 UBFD1O14562 309 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GRID2O43424 1007 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PGLSO95336 258 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 LATS1O95835 1130 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 TYRP14679 529 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 FDXRP22570 491 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 VIPR2P41587 438 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SLC14A2Q15849 920 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PDCD2Q16342 344 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 FAM83EQ2M2I3 478 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PITRM1Q5JRX3 1037 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 TAS2R42Q7RTR8 314 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SFTPA1Q8IWL2 248 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PARP9Q8IXQ6 854 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GPR65Q8IYL9 337 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CPXM2Q8N436 756 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PAF1Q8N7H5 531 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CHST14Q8NCH0 376 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GPR150Q8NGU9 434 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GIMAP7Q8NHV1 300 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF707Q96C28 371 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NSL1Q96IY1 281 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 TSNARE1Q96NA8 513 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NSUN5Q96P11 429 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GCNAQ96QF7 691 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GPR21Q99679 349 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 GPR63Q9BZJ6 419 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 WWP1Q9H0M0 922 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 RETREG1Q9H6L5 497 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SARS2Q9NP81 518 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 TXLNGQ9NUQ3 528 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 IL17CQ9P0M4 197 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 KIAA1522Q9P206 1035 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SSX2IPQ9Y2D8 614 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 A0A087X1B8 175 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 C1orf232A0A0U1RR37 186 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NCF1BA6NI72 391 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NCF1CA8MVU1 366 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 UBXN8O00124 270 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 DCXO43602 365 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SRP72O76094 671 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 COL6A2P12110 1019 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MTHFD2P13995 350 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NCF1P14598 390 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CD1DP15813 335 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF37AP17032 561 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ITGB6P18564 788 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CREMQ03060 361 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 TYSND1Q2T9J0 566 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 TCEAL5Q5H9L2 206 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CTSL3PQ5NE16 218 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ARMC12Q5T9G4 340 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NAIF1Q69YI7 327 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 RETSATQ6NUM9 610 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 EPGNQ6UW88 154 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF783Q6ZMS7 281 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 DPY19L3Q6ZPD9 716 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 Q6ZVU0 165 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CCDC91Q7Z6B0 441 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 EFCAB3Q8N7B9 438 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SNX31Q8N9S9 440 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SIDT2Q8NBJ9 832 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 IRF7Q92985 503 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 AARSD1Q9BTE6 412 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ILKAPQ9H0C8 392 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ZDHHC4Q9NPG8 344 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MBD1Q9UIS9 605 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MAFFQ9ULX9 164 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 APOBEC2Q9Y235 224 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MTCL1Q9Y4B5 1905 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 CCDC189A1A4V9 331 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 NPIPB15A6NHN6 443 aaPredicted RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 B2RBV5 119 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 RFXAPO00287 272 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms