RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SATB1Q01826 763 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 SEMG2Q02383 582 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 UGP2Q16851 508 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 HSF5Q4G112 596 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 EOGTQ5NDL2 527 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 C6orf89Q6UWU4 347 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 TMEM92Q6UXU6 159 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 OR2T3Q8NH03 318 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 ZNF75CPQ92670 426 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 PEX13Q92968 403 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 CABS1Q96KC9 395 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 PITPNM3Q9BZ71 974 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 SLC13A1Q9BZW2 595 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 SLC6A17Q9H1V8 727 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 DCDC2Q9UHG0 476 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 GLRA3O75311 464 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 ITGB7P26010 798 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 HNF1BP35680 557 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 INSCQ1MX18 579 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 TSTD2Q5T7W7 516 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 KYAT3Q6YP21 454 aaKnown RBP18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 MDGA1Q8NFP4 955 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 GABPB2Q8TAK5 448 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 MKRN2Q9H000 416 aaKnown RBP18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 PPIL1Q9Y3C6 166 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 KCTD3Q9Y597 815 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 ARL5AQ9Y689 179 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 A0A1W2PQ67 120 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 MROH6A6NGR9 719 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 CAPN8A6NHC0 703 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 NPIPB15A6NHN6 443 aaPredicted RBP18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 UPK3BL1B0FP48 263 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 UPK3BL2E5RIL1 263 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 C1QTNF3-AMACRE9PGA6 284 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 LDB2O43679 373 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 VAPBO95292 243 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 ARNTP27540 789 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 SERPINB8P50452 374 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 RPS14P62263 151 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 GAS6Q14393 721 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 CST6Q15828 149 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 CNGA3Q16281 694 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 TJAP1Q5JTD0 557 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 YTHDF3Q7Z739 585 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 SYNPOQ8N3V7 929 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 DCLK2Q8N568 766 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 BRSK1Q8TDC3 778 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 HCAR2Q8TDS4 363 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 MCCC1Q96RQ3 725 aaPredicted RBP18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 FAM167BQ9BTA0 163 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 C12orf65Q9H3J6 166 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 ZNF711Q9Y462 761 aa18.73■□□□□ 0.59
EXOSC3-201ENST00000327304 A8MX80 341 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 MID1O15344 667 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 BUD23O43709 281 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 RNASEH1O60930 286 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 SLC4A1P02730 911 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 TYK2P29597 1187 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 SERPINB4P48594 390 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 POLD2P49005 469 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 POLR2LP62875 67 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 PDE1CQ14123 709 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 DBN1Q16643 649 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 ZNF776Q68DI1 518 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 USP45Q70EL2 814 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 LYSMD3Q7Z3D4 306 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 GLT6D1Q7Z4J2 308 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 TSPAN33Q86UF1 283 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 TRIM42Q8IWZ5 723 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 TTC30BQ8N4P2 665 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 CALML6Q8TD86 181 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 SCRN2Q96FV2 425 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 PPP1R16AQ96I34 528 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 NELL2Q99435 816 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 RHOJQ9H4E5 214 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 MANSC1Q9H8J5 431 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 MAGEE1Q9HCI5 957 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 PCDH12Q9NPG4 1184 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 C2orf42Q9NWW7 574 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 SLC2A6Q9UGQ3 507 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 RIMKLBQ9ULI2 386 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 EDF1O60869 148 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 MPOP05164 745 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 THOC5Q13769 683 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 PTPRCAPQ14761 206 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 ZKSCAN8Q15776 578 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 SMAD1Q15797 465 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 FAM46CQ5VWP2 391 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 TRIM67Q6ZTA4 783 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 KIAA0408Q6ZU52 694 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 TTC7BQ86TV6 843 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 AADATQ8N5Z0 425 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 FLCNQ8NFG4 579 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 VPS39Q96JC1 886 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 GPR22Q99680 433 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 FBRSQ9HAH7 460 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 SNX15Q9NRS6 342 aa18.72■□□□□ 0.59
EXOSC3-201ENST00000327304 B4GALT6Q9UBX8 382 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms