RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C2orf81A6NN90 581 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 H7C4K7 107 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 INPPL1O15357 1258 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 INSIG1O15503 277 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 CDK14O94921 469 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 SNRPB2P08579 225 aaKnown RBP11.52□□□□□ -0.57
PTPN2-201ENST00000309660 UQCRBP14927 111 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 CTPS1P17812 591 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 ITGB6P18564 788 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 HOXD10P28358 340 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 FOLH1Q04609 750 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 SQLEQ14534 574 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 OR52E8Q6IFG1 317 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 IFNEQ86WN2 208 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 FBXO39Q8N4B4 442 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 PIP4K2CQ8TBX8 421 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 WBP2Q969T9 261 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 PRICKLE1Q96MT3 831 aaPredicted RBP11.52□□□□□ -0.57
PTPN2-201ENST00000309660 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 BCAP29Q9UHQ4 241 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 RAI2Q9Y5P3 530 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 DNAJC15Q9Y5T4 150 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 E5RI56 91 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 H0Y626 953 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 STX7O15400 261 aaKnown RBP11.52□□□□□ -0.57
PTPN2-201ENST00000309660 CLASP2O75122 1294 aaKnown RBP11.52□□□□□ -0.57
PTPN2-201ENST00000309660 C1RP00736 705 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 FDXRP22570 491 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 DNAJB1P25685 340 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 AGTR2P50052 363 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 SLC7A2P52569 658 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 RING1Q06587 406 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 TCTN1Q2MV58 587 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 VPS26BQ4G0F5 336 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 MDGA1Q8NFP4 955 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 HMGCLL1Q8TB92 370 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 TWIST2Q8WVJ9 160 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 MAELQ96JY0 434 aaKnown RBP11.52□□□□□ -0.57
PTPN2-201ENST00000309660 PKP2Q99959 881 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 PLK2Q9NYY3 685 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 FAM92AA1XBS5 289 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 TPST1O60507 370 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 IGLV3-27P01718 113 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 SPATA31D3P0C874 917 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 MC4RP32245 332 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 NKX3-2P78367 333 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 GRB7Q14451 532 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 MAPRE2Q15555 327 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PSAPL1Q6NUJ1 521 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 SPATA31D4Q6ZUB0 917 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ADGRG6Q86SQ4 1221 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PIANPQ8IYJ0 282 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 CLYBLQ8N0X4 340 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 SIDT2Q8NBJ9 832 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 AUTS2Q8WXX7 1259 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 EME1Q96AY2 570 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 AARSD1Q9BTE6 412 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 RNF38Q9H0F5 515 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 MAGEH1Q9H213 219 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 MEAF6Q9HAF1 191 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 TRPM5Q9NZQ8 1165 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 VPS28Q9UK41 221 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 SNX13Q9Y5W8 968 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 FBP2O00757 339 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 GIPC1O14908 333 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 AZIN1O14977 448 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 NRP2O60462 931 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PGM3O95394 542 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 HGFP14210 728 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 CAPRIN1Q14444 709 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PDK3Q15120 406 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 RBBP7Q16576 425 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 GSTA3Q16772 222 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ATXN7L2Q5T6C5 722 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 THEMIS2Q5TEJ8 643 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 IL23RQ5VWK5 629 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 NR1H4Q96RI1 486 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 POLR3BQ9NW08 1133 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 IL37Q9NZH6 218 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 FCF1Q9Y324 198 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 VWA8A3KMH1 1905 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 A0A0J9YYE9 177 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ZNF840PA6NDX5 716 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PRORSD1PA6NEY8 169 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 TRIM38O00635 465 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ALDOCP09972 364 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ADSLP30566 484 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 CDH4P55283 916 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 SEMG2Q02383 582 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 RAD51Q06609 339 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
PTPN2-201ENST00000309660 BFSP2Q13515 415 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 AMIGO2Q86SJ2 522 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 ST13P4Q8IZP2 240 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms