RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FBXL3Q9UKT7 428 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ENTPD3O75355 529 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 LSM8O95777 96 aaKnown RBP12.62□□□□□ -0.39
USP38-201ENST00000307017 FTH1P02794 183 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 SLC6A2P23975 617 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 GNALP38405 381 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 MBTD1Q05BQ5 628 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 HYAL2Q12891 473 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ZZZ3Q8IYH5 903 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ITM2CQ9NQX7 267 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 SAR1AQ9NR31 198 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ASTN1O14525 1302 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 A0A1W2PQ72 361 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ARHGEF33A8MVX0 844 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 PGLSO95336 258 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ANXA5P08758 320 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 BMP6P22004 513 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 PRKCHP24723 683 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 PTPN3P26045 913 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 CXCL17Q6UXB2 119 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 EIF1ADQ8N9N8 165 aaKnown RBP12.62□□□□□ -0.39
USP38-201ENST00000307017 RBM15BQ8NDT2 890 aaKnown RBP12.62□□□□□ -0.39
USP38-201ENST00000307017 XAGE5Q8WWM1 108 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 ZNF570Q96NI8 536 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 KCNC2Q96PR1 638 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 OR51V1Q9H2C8 321 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
USP38-201ENST00000307017 OR2AG2A6NM03 316 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CCL16O15467 120 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 TUFMP49411 452 aaKnown RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 CHAF1BQ13112 559 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SNAPC1Q16533 368 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 KYAT3Q6YP21 454 aaKnown RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 CROCCP3Q8IVE0 287 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 ANKFN1Q8N957 763 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SPATA22Q8NHS9 363 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 PTCD2Q8WV60 388 aaKnown RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 ZFP3Q96NJ6 502 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SNX4O95219 450 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CREB1P16220 341 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 TGFB2P61812 414 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 PSMD5Q16401 504 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 LIPMQ5VYY2 423 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 PRELID2Q8N945 189 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 REPS2Q8NFH8 660 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SPATC1LQ9H0A9 340 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 AASDHPPTQ9NRN7 309 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SNTG1Q9NSN8 517 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CDH22Q9UJ99 828 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 FBXW2Q9UKT8 454 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 METTL18O95568 372 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 ZNF24P17028 368 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 NR2C2P49116 596 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 DRG2P55039 364 aaKnown RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 RTP1P59025 263 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 PCID2Q5JVF3 399 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CLEC12AQ5QGZ9 265 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 STYK1Q6J9G0 422 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 UBE2R2Q712K3 238 aaPredicted RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 SPATC1Q76KD6 591 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 LMLNQ96KR4 655 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 S100A14Q9HCY8 104 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 BCKDKO14874 412 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 MATN4O95460 622 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 BMP7P18075 431 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SLC5A3P53794 718 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 MLLT10P55197 1068 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CDH15P55291 814 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CSTF1Q05048 431 aaKnown RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 KCTD8Q6ZWB6 473 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CSGALNACT1Q8TDX6 532 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SLC35C1Q96A29 364 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CRAMP1Q96RY5 1269 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 AGAP2Q99490 1192 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 PIGUQ9H490 435 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 PRDM12Q9H4Q4 367 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 AAASQ9NRG9 546 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 NEXMIFQ5QGS0 1516 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CCRL2O00421 344 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 AMHP03971 560 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 CBLP22681 906 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 SHMT1P34896 483 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 TTC27Q6P3X3 843 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 APOLD1Q96LR9 279 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 PLA2G12BQ9BX93 195 aa12.61□□□□□ -0.39
USP38-201ENST00000307017 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
USP38-201ENST00000307017 CHMP1AQ9HD42 196 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms