RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 PSEN2P49810 448 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 SEPHS1P49903 392 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 DCLRE1AQ6PJP8 1040 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 UTS2BQ765I0 119 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 RALGPS2Q86X27 583 aaPredicted RBP12.83□□□□□ -0.36
COL3A1-201ENST00000304636 NIPA2Q8N8Q9 360 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 ACSS2Q9NR19 701 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 AAASQ9NRG9 546 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 CSH1P0DML2 217 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 CSH2P0DML3 217 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 PTPRAP18433 802 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 KLRC2P26717 231 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 NTSP30990 170 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 MAPK8P45983 427 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 TRIM32Q13049 653 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 CYP20A1Q6UW02 462 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 TAMM41Q96BW9 452 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 AGAP2Q99490 1192 aa12.83□□□□□ -0.36
COL3A1-201ENST00000304636 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
COL3A1-201ENST00000304636 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 IRGMA1A4Y4 181 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 UBE2QL1A1L167 161 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 OR10H3O60404 316 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 TMEM63AO94886 807 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 URODP06132 367 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PAX3P23760 479 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 SIM2Q14190 667 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 GNA13Q14344 377 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 C5orf22Q49AR2 442 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 GALNT5Q7Z7M9 940 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 SLC35B2Q8TB61 432 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 NXF3Q9H4D5 531 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 BPIFA1Q9NP55 256 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PRDM8Q9NQV8 689 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 CMTM6Q9NX76 183 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PPM1HQ9ULR3 514 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 HES2Q9Y543 173 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PCDHA2Q9Y5H9 948 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 NRCAMQ92823 1304 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ANKDD1BA6NHY2 528 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ATP5C1P36542 298 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 CPSF6Q16630 551 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PLET1Q6UQ28 207 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 R3HCC1LQ7Z5L2 792 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 OR52L1Q8NGH7 329 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 UROC1Q96N76 676 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 TEFMQ96QE5 360 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ENTPD4Q9Y227 616 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 RBMX2Q9Y388 322 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 TELO2Q9Y4R8 837 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 LYVE1Q9Y5Y7 322 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 SCELO95171 688 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ITGAXP20702 1163 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 GNPDA1P46926 289 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 IL18R1Q13478 541 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 GALNT3Q14435 633 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 CLEC6AQ6EIG7 209 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ZNF438Q7Z4V0 828 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ZNF567Q8N184 647 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 FAM156AQ8NDB6 213 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PIH1D2Q8WWB5 315 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 MFSD3Q96ES6 412 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 RNF19AQ9NV58 838 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PEX16Q9Y5Y5 336 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 RPP40O75818 363 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ADORA2AP29274 412 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 CTSKP43235 329 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 AP5B1Q2VPB7 878 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PDCD4Q53EL6 469 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PAOXQ6QHF9 649 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
COL3A1-201ENST00000304636 ELMO1Q92556 727 aa12.82□□□□□ -0.36
COL3A1-201ENST00000304636 NDUFS2O75306 463 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 EPORP19235 508 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 PSMD4P55036 377 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 LCP2Q13094 533 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 GPR158Q5T848 1215 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 OTOP3Q7RTS5 596 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 PACRGLQ8N7B6 248 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 EEF1AKMT1Q8WVE0 214 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 ASB9Q96DX5 294 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 FCRL2Q96LA5 508 aaPredicted RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 AASDHPPTQ9NRN7 309 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 RASSF1Q9NS23 344 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 ZNHIT2Q9UHR6 403 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 VPS51Q9UID3 782 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 CNTN6Q9UQ52 1028 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 TDRKHQ9Y2W6 561 aaKnown RBP12.81□□□□□ -0.36
COL3A1-201ENST00000304636 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 NPEPPSL1A6NEC2 478 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 C2CD4BA6NLJ0 364 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 CLDN5O00501 218 aa12.81□□□□□ -0.36
COL3A1-201ENST00000304636 SLC6A2P23975 617 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms