RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 BFSP2Q13515 415 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 UGT3A2Q3SY77 523 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TXNDC8Q6A555 127 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 FAM45BPQ6NSW5 357 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 UGT3A1Q6NUS8 523 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TMEM150AQ86TG1 271 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 SIDT2Q8NBJ9 832 aaKnown RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 FAM45AQ8TCE6 357 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TSPAN17Q96FV3 270 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TUBGCP5Q96RT8 1024 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 AARSD1Q9BTE6 412 aaKnown RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 CCDC28BQ9BUN5 200 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TDRD1Q9BXT4 1180 aaKnown RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 MAGEH1Q9H213 219 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 HIPK3Q9H422 1215 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 TUBB1Q9H4B7 451 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 ZNF334Q9HCZ1 680 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 SEMA4BQ9NPR2 832 aaPredicted RBP11.75□□□□□ -0.53
RHO-201ENST00000296271 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 ADA2Q9NZK5 511 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 MTRRQ9UBK8 725 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 RAI2Q9Y5P3 530 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 MYOFQ9NZM1 2061 aa11.75□□□□□ -0.53
RHO-201ENST00000296271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 H7C4K7 107 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 UBDO15205 165 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 KDELR3O43731 214 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 LINC00032P0C843 101 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 GJA1P17302 382 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SOX11P35716 441 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 CDH4P55283 916 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 FLOT2Q14254 428 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 FASTKQ14296 549 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 PTPRNQ16849 979 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 GEN1Q17RS7 908 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SPOUT1Q5T280 376 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 MRNIPQ6NTE8 343 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 LPGAT1Q92604 370 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ATOH8Q96SQ7 321 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 YIPF3Q9GZM5 350 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 COPS7BQ9H9Q2 264 aaPredicted RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 MEAF6Q9HAF1 191 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 STK39Q9UEW8 545 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SEPT3Q9UH03 358 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 PCDHGA7Q9Y5G6 932 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 PIP5K1BO14986 540 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 TBL1XO60907 577 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SRP72O76094 671 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 TMCC1O94876 653 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 LUC7L3O95232 432 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 GFAPP14136 432 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 GRAMD1BQ3KR37 738 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 FOXB2Q5VYV0 432 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 FUNDC1Q8IVP5 155 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ARL14EPQ8N8R7 260 aaPredicted RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 GATA6Q92908 595 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 HBEGFQ99075 208 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 PIDD1Q9HB75 910 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 BATF3Q9NR55 127 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 TRPC5OSA6NMA1 111 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SUPT3HB4E1H0 165 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 SMAD6O43541 496 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 SUPT3HO75486 399 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 COL6A1P12109 1028 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 EEF1DP29692 281 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 MC4RP32245 332 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 APLP1P51693 650 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 HERVK_113P63132 956 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 TWF1Q12792 350 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 GK3PQ14409 553 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 C5orf22Q49AR2 442 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ZRANB3Q5FWF4 1079 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 FBXL19Q6PCT2 694 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 AAGABQ6PD74 315 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 CYP2R1Q6VVX0 501 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 CHSY3Q70JA7 882 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 PDSS2Q86YH6 399 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ADAMTS19Q8TE59 1207 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 ERVK-6Q9BXR3 956 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 NLE1Q9NVX2 485 aaPredicted RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
RHO-201ENST00000296271 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
RHO-201ENST00000296271 PSMD12O00232 456 aaPredicted RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 CLASP2O75122 1294 aaKnown RBP11.73□□□□□ -0.53
RHO-201ENST00000296271 GPC4O75487 556 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms