RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 TOP3AQ13472 1001 aaPredicted RBP16.58■□□□□ 0.24
SCAP-201ENST00000265565 HIST2H2ACQ16777 129 aaPredicted RBP16.58■□□□□ 0.24
SCAP-201ENST00000265565 HIST2H2AA3Q6FI13 130 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 FBRSL1Q9HCM7 1045 aaKnown RBP16.58■□□□□ 0.24
SCAP-201ENST00000265565 FBXW11Q9UKB1 542 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 CNOT6Q9ULM6 557 aaKnown RBP16.58■□□□□ 0.24
SCAP-201ENST00000265565 ASLP04424 464 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 SEPHS1P49903 392 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 TLR1Q15399 786 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 NOMO2Q5JPE7 1267 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 ZCCHC8Q6NZY4 707 aaKnown RBP16.58■□□□□ 0.24
SCAP-201ENST00000265565 XKR5Q6UX68 686 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 NAT16Q8N8M0 369 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 HTRA1Q92743 480 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 SLC2A6Q9UGQ3 507 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 MAGEL2Q9UJ55 1249 aa16.58■□□□□ 0.24
SCAP-201ENST00000265565 PRRC2BQ5JSZ5 2229 aaKnown RBP16.58■□□□□ 0.24
SCAP-201ENST00000265565 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TTPAP49638 278 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 STARD3Q14849 445 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 BRMS1LQ5PSV4 323 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 ZNF549Q6P9A3 640 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 KIAA0408Q6ZU52 694 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TRIM74Q86UV6 250 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TRIM73Q86UV7 250 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 AMER2Q8N7J2 671 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TRPV2Q9Y5S1 764 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 C4AP0C0L4 1744 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 C4BP0C0L5 1744 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 LRP6O75581 1613 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 EPN2O95208 641 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 ALDH2P05091 517 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 COX7A2P14406 83 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 CES1P23141 567 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 ETV4P43268 484 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 SLC16A1P53985 500 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TSTD2Q5T7W7 516 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 HAPLN2Q9GZV7 340 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 ADPRHL2Q9NX46 363 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 PCDHB9Q9Y5E1 797 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 J3QRK9 145 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TSC22D2O75157 780 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 FGF1P05230 155 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 CTPS1P17812 591 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 LPOP22079 712 aaPredicted RBP16.57■□□□□ 0.24
SCAP-201ENST00000265565 GCAP28676 217 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 SLC10A2Q12908 348 aaPredicted RBP16.57■□□□□ 0.24
SCAP-201ENST00000265565 ZNF846Q147U1 533 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 TSNQ15631 228 aaKnown RBP16.57■□□□□ 0.24
SCAP-201ENST00000265565 RETSATQ6NUM9 610 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 FBXL8Q96CD0 374 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 KRT84Q9NSB2 600 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 GIMAP2Q9UG22 337 aa16.57■□□□□ 0.24
SCAP-201ENST00000265565 SETD1AO15047 1707 aaKnown RBP16.57■□□□□ 0.24
SCAP-201ENST00000265565 MATN3O15232 486 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 TREHO43280 583 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 GPIP06744 558 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 GPC1P35052 558 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 IRF8Q02556 426 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 FGD3Q5JSP0 725 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 ARMC12Q5T9G4 340 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 AFTPHQ6ULP2 937 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 ERI1Q8IV48 349 aaKnown RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 KLHL23Q8NBE8 558 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 SNX27Q96L92 541 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 DNAAF2Q9NVR5 837 aaKnown RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 KLHL3Q9UH77 587 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCAP-201ENST00000265565 MYH1P12882 1939 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 RGS20O76081 388 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 PITX1P78337 314 aaPredicted RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 RHDQ02161 417 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 ALDH6A1Q02252 535 aaKnown RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 INO80DQ53TQ3 878 aaPredicted RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 CDCA2Q69YH5 1023 aaPredicted RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 ATG14Q6ZNE5 492 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 PROSER1Q86XN7 944 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 UBASH3BQ8TF42 649 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 SLC39A8Q9C0K1 460 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 ZBTB26Q9HCK0 441 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 BTBD3Q9Y2F9 522 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 PNMA8CA0A1B0GUJ8 204 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 TAF4O00268 1085 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 OR4F21O95013 312 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 MC4RP32245 332 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 LCP2Q13094 533 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 RBM20Q5T481 1227 aaKnown RBP16.56■□□□□ 0.24
SCAP-201ENST00000265565 MCOLN3Q8TDD5 553 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 DYRK4Q9NR20 520 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 EHD3Q9NZN3 535 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 PADI4Q9UM07 663 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 COQ6Q9Y2Z9 468 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 C10orf71Q711Q0 1435 aa16.56■□□□□ 0.24
SCAP-201ENST00000265565 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.245e-6■■■■■ 111.1
SCAP-201ENST00000265565 A0A1W2PQH9 124 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms