RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SLC17A9Q9BYT1 436 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 ETNK1Q9HBU6 452 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 XAB2Q9HCS7 855 aaKnown RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 TM9SF3Q9HD45 589 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 ARFGAP3Q9NP61 516 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 PARD6AQ9NPB6 346 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 FZD3Q9NPG1 666 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 GRHL1Q9NZI5 618 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 CDV3Q9UKY7 258 aaKnown RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 NFU1Q9UMS0 254 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 RPL26L1Q9UNX3 145 aaKnown RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 COQ6Q9Y2Z9 468 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 PLXNA2O75051 1894 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 SPAG17Q6Q759 2223 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CAPN8A6NHC0 703 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ANKRD66B4E2M5 251 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 RAD51BO15315 384 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.56
PFDN1-201ENST00000261813 PPFIA2O75334 1257 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 TM7SF2O76062 418 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 PAK4O96013 591 aaPredicted RBP11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ATXN1LP0C7T5 689 aaKnown RBP11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CYP2A6P11509 494 aaPredicted RBP11.57□□□□□ -0.56
PFDN1-201ENST00000261813 MLNP12872 115 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 C6P13671 934 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 GM2AP17900 193 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 VIPR1P32241 457 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 HOXD12P35452 270 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 HNF1BP35680 557 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CHRNA4P43681 627 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ARL4CP56559 192 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 SPEM2Q0P670 501 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CBLBQ13191 982 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 MPP3Q13368 585 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 OLIG2Q13516 323 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CNGA3Q16281 694 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CDKN3Q16667 212 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 SETMARQ53H47 684 aaPredicted RBP11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ARMC3Q5W041 872 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 TCEAL6Q6IPX3 200 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 NAPEPLDQ6IQ20 393 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CRTC1Q6UUV9 634 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 USP45Q70EL2 814 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 PDIK1LQ8N165 341 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 TAB3Q8N5C8 712 aaPredicted RBP11.57□□□□□ -0.56
PFDN1-201ENST00000261813 NAT8LQ8N9F0 302 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 FBXO25Q8TCJ0 367 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ASB12Q8WXK4 309 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CPT1BQ92523 772 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 TCEAL3Q969E4 200 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 SERAC1Q96JX3 654 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CNTNAP3BQ96NU0 1288 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 MYOCQ99972 504 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ADGRE3Q9BY15 652 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CNTNAP3Q9BZ76 1288 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 LRRC40Q9H9A6 602 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 ZDHHC18Q9NUE0 388 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 DMTF1Q9Y222 760 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 CA5BQ9Y2D0 317 aa11.57□□□□□ -0.56
PFDN1-201ENST00000261813 A0A1B0GTW7 788 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 A0A1W2PR77 199 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 BCAT2O15382 392 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-201ENST00000261813 NDST3O95803 873 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 AGTP01019 485 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 EPOP01588 193 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 WNT1P04628 370 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 APRTP07741 180 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 ELFN1P0C7U0 828 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 H2AFXP16104 143 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-201ENST00000261813 HNRNPA2B1P22626 353 aaKnown RBP11.56□□□□□ -0.56
PFDN1-201ENST00000261813 ADRA1AP35348 466 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 NUDT1P36639 197 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 DPP6P42658 865 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 RACK1P63244 317 aaKnown RBP11.56□□□□□ -0.56
PFDN1-201ENST00000261813 SPARCL1Q14515 664 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 KCNJ11Q14654 390 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 NR6A1Q15406 480 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 TRIM61Q5EBN2 209 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 SIRPB2Q5JXA9 342 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 LRRC66Q68CR7 880 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 KCTD11Q693B1 232 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 LAYNQ6UX15 382 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 CENPUQ71F23 418 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 NDUFAF2Q8N183 169 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 CBARPQ8N350 705 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-201ENST00000261813 SLC25A41Q8N5S1 370 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 TMEM145Q8NBT3 493 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 CAVIN3Q969G5 261 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 LYSMD1Q96S90 227 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 KLF6Q99612 283 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-201ENST00000261813 FICDQ9BVA6 458 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 FSCN3Q9NQT6 498 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 SEMA4GQ9NTN9 838 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 SUSD2Q9UGT4 822 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 NCOR2Q9Y618 2525 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 DNAH14Q0VDD8 3507 aa11.56□□□□□ -0.56
PFDN1-201ENST00000261813 PRAMEF26H0Y7S4 382 aa11.55□□□□□ -0.56
PFDN1-201ENST00000261813 H0Y8X5 98 aa11.55□□□□□ -0.56
PFDN1-201ENST00000261813 LRP3O75074 770 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms