RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LRRC4Q9HBW1 653 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 ALG13Q9NP73 1137 aaKnown RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 PIN4Q9Y237 131 aaKnown RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 GIT1Q9Y2X7 761 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 Q9Y3F1 56 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 HBS1LQ9Y450 684 aaKnown RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 HES2Q9Y543 173 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 PRSS38A1L453 326 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 F8W8V4 182 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 DCLK1O15075 740 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 PAX4O43316 350 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 MFSD11O43934 449 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 UGT1A9O60656 530 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 POLBP06746 335 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GM2AP17900 193 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 TKTP29401 623 aaKnown RBP7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GP5P40197 560 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GARSP41250 739 aaKnown RBP7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CDK7P50613 346 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 LILRA4P59901 499 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CAP1Q01518 475 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 DEUP1Q05D60 604 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF33AQ06730 810 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 ADIGQ0VDE8 80 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 BMPR2Q13873 1038 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 NFE2Q16621 373 aaPredicted RBP7.96□□□□□ -1.13
CXCR4-201ENST00000241393 DNAL1Q4LDG9 190 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF385BQ569K4 471 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 SYCP2LQ5T4T6 812 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 OTUD1Q5VV17 481 aaPredicted RBP7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GRAMD4Q6IC98 578 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CNKSR3Q6P9H4 555 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 FAM180AQ6UWF9 173 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 DENND5BQ6ZUT9 1274 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 FAM131BQ86XD5 332 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 TMPRSS6Q8IU80 811 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CHPFQ8IZ52 775 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 SIX6OS1Q8N1H7 587 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 TMEM86AQ8N2M4 240 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 MPP5Q8N3R9 675 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 BRI3BPQ8WY22 251 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 ARNTL2Q8WYA1 636 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 MCUR1Q96AQ8 359 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 FAM149B1Q96BN6 582 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF570Q96NI8 536 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 VAT1Q99536 393 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CPNE1Q99829 537 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 KATNAL1Q9BW62 490 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 NMUR2Q9GZQ4 415 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 C1orf21Q9H246 121 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 UGT1A7Q9HAW7 530 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 UGT1A10Q9HAW8 530 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 UGT1A8Q9HAW9 530 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GCM1Q9NP62 436 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CNGB3Q9NQW8 809 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 SLC38A7Q9NVC3 462 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 TAS2R1Q9NYW7 299 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GJD2Q9UKL4 321 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 CNOT6Q9ULM6 557 aaKnown RBP7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GINS2Q9Y248 185 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 GPR45Q9Y5Y3 372 aa7.96□□□□□ -1.13
CXCR4-201ENST00000241393 FAM237BA0A1B0GVD1 139 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MAGEB16A2A368 324 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 WDR27A2RRH5 827 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 EEF2KO00418 725 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PLIN3O60664 434 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 F9P00740 461 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SERPINE1P05121 402 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SERPINA6P08185 405 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 FAM200BP0CF97 657 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MED14OSP0DP75 135 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 AOC1P19801 751 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 AKAP5P24588 427 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 HOXC8P31273 242 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ADRA1BP35368 520 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MAGEA12P43365 314 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 LHX1P48742 406 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CPT1AP50416 773 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SESN2P58004 480 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 SEMA3BQ13214 749 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ZRSR2Q15696 482 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CCDC153Q494R4 210 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 DCAF6Q58WW2 860 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 CT83Q5H943 113 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 GRTP1Q5TC63 336 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 RFX8Q6ZV50 586 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 OTOP2Q7RTS6 562 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 ARID3BQ8IVW6 561 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 STPG3Q8N7X2 389 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 RELTQ969Z4 430 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 NAF1Q96HR8 494 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PPP1R10Q96QC0 940 aaKnown RBP7.95□□□□□ -1.14
CXCR4-201ENST00000241393 LGMNQ99538 433 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 MTG2Q9H4K7 406 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 PRDM12Q9H4Q4 367 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 LRRC40Q9H9A6 602 aa7.95□□□□□ -1.14
CXCR4-201ENST00000241393 XPNPEP3Q9NQH7 507 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms