RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 MCOLN2Q8IZK6 566 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 DEFB118Q96PH6 123 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 SLC24A2Q9UI40 661 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
NEK9-201ENST00000238616 A8MU76 341 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 APOC1P02654 83 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ACTR3P61158 418 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 GPRIN3Q6ZVF9 776 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 EXD2Q9NVH0 621 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 CAPN6Q9Y6Q1 641 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ARHGEF33A8MVX0 844 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 E7ENQ6 273 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ATP6V1G2O95670 118 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 EPHX1P07099 455 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 PRKAA2P54646 552 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 XKR4Q5GH76 650 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 TMPRSS6Q8IU80 811 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 LGMNQ99538 433 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 POLR3HQ9Y535 204 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 PROSCO94903 275 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 ZNF132P52740 706 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 AFTPHQ6ULP2 937 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 KDM7AQ6ZMT4 941 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 GFM1Q96RP9 751 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 ATP6AP2A0A1C7CYW4 349 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 ATP6AP2O75787 350 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 LTA4HP09960 611 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 PSMD5Q16401 504 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 ZNF557Q8N988 423 aaPredicted RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 KLK6Q92876 244 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 PTPN18Q99952 460 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SPAG4Q9NPE6 437 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 FBXW2Q9UKT8 454 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 FAM172BPA6NC97 362 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 MRPS6P82932 125 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 SLC22A8Q8TCC7 542 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 ARNTL2Q8WYA1 636 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 PNPLA8Q9NP80 782 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 IFT52Q9Y366 437 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 HSD3B1P14060 373 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SP3Q02447 781 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 TLR1Q15399 786 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 DEPDC4Q8N2C3 294 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 AIFM2Q9BRQ8 373 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 KCNE2Q9Y6J6 123 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 FPGTO14772 594 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SLC31A1O15431 190 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 GATBO75879 557 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 FSHRP23945 695 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 MC4RP32245 332 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 LRP8Q14114 963 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 C11orf65Q8NCR3 313 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SNX33Q8WV41 574 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 MORF4L1Q9UBU8 362 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 C3orf18Q9UK00 162 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 H3BM21 787 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 CBX6O95503 412 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 C22orf31O95567 290 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
NEK9-201ENST00000238616 AXLP30530 894 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 MAN2A2P49641 1150 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 FAM183BPQ6ZVS7 135 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 AMER2Q8N7J2 671 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 E9PCH4 1651 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 GPR75-ASB3A0A0A6YYF3 556 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 AHCYL1O43865 530 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 STBD1O95210 358 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SCGB1D2O95969 90 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 TROAPQ12815 778 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 PTPRNQ16849 979 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 NEPROQ6NW34 567 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
NEK9-201ENST00000238616 SUV39H1O43463 412 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 CXCR3P49682 368 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 Q4G0T1 1027 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms