RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MS4A2Q01362 244 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 OGFRL1Q5TC84 451 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-201ENST00000237186 CXorf57Q6NSI4 855 aaKnown RBP16.13■□□□□ 0.17
UBE3D-201ENST00000237186 HACD2Q6Y1H2 254 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 GK5Q6ZS86 529 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 MFN1Q8IWA4 741 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 NPAS2Q99743 824 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 RNF38Q9H0F5 515 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 CACNA2D2Q9NY47 1150 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 FIS1Q9Y3D6 152 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 PCDHGA7Q9Y5G6 932 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 RAI2Q9Y5P3 530 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 MIA3Q5JRA6 1907 aa16.13■□□□□ 0.17
UBE3D-201ENST00000237186 ANKRD66B4E2M5 251 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 H7C0S8 307 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 TRIM38O00635 465 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 CD160O95971 181 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 CAPNS1P04632 268 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 PSME3P61289 254 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 FASTKQ14296 549 aaKnown RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 PPP1R3AQ16821 1122 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 SFT2D3Q587I9 215 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 C19orf60Q96EN9 201 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 BTBD9Q96Q07 612 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 SLC25A23Q9BV35 468 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 C1QTNF3Q9BXJ4 246 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 ADGRE3Q9BY15 652 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 PACSIN3Q9UKS6 424 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 DNAJC15Q9Y5T4 150 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 OAS3Q9Y6K5 1087 aaKnown RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 KLK8O60259 260 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 NDUFS3O75489 264 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 RHOBTB1O94844 696 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 SNRPB2P08579 225 aaKnown RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 LINGO3P0C6S8 592 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 PRSS56P0CW18 603 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 PIM1P11309 404 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 CLCN4P51793 760 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 ADARP55265 1226 aaKnown RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 IRX1P78414 480 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 ARF5P84085 180 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 INO80DQ53TQ3 878 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 CLEC6AQ6EIG7 209 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 OR52E8Q6IFG1 317 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 KIAA1841Q6NSI8 718 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 C8orf82Q6P1X6 216 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 NCEH1Q6PIU2 408 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 PAQR3Q6TCH7 311 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 HERC6Q8IVU3 1022 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 RYBPQ8N488 228 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-201ENST00000237186 TOP1MTQ969P6 601 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 BIRC8Q96P09 236 aa16.12■□□□□ 0.17
UBE3D-201ENST00000237186 EIF4E1BA6NMX2 242 aaKnown RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 UBXN8O00124 270 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 CBX4O00257 560 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 FBP2O00757 339 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 PFDN6O15212 129 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 KIF1CO43896 1103 aaKnown RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 SRP72O76094 671 aaKnown RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 SOD2P04179 222 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 PEX2P28328 305 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 FMO4P31512 558 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 ALDH1A3P47895 512 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 CDH13P55290 713 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 PKNOX1P55347 436 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 TRIP10Q15642 601 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 PFKFB4Q16877 469 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 AGKQ53H12 422 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 RNF219Q5W0B1 726 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 KANK2Q63ZY3 851 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 LPCAT4Q643R3 524 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 NKAPQ8N5F7 415 aaKnown RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 WBP2Q969T9 261 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 ASB9Q96DX5 294 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 SPDL1Q96EA4 605 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 SCLYQ96I15 445 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 EXOC2Q96KP1 924 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 DEFB118Q96PH6 123 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 CCDC68Q9H2F9 335 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 PAK6Q9NQU5 681 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 SPATS2LQ9NUQ6 558 aaKnown RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 DLGAP2Q9P1A6 1054 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 SUCOQ9UBS9 1254 aaKnown RBP16.11■□□□□ 0.17
UBE3D-201ENST00000237186 YIPF1Q9Y548 306 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 PCDHGC4Q9Y5F7 938 aa16.11■□□□□ 0.17
UBE3D-201ENST00000237186 UBA6A0AVT1 1052 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 STX16-NPEPL1H3BU86 382 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 GFRA2O00451 464 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 AZIN1O14977 448 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 SIX3O95343 332 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 PYGLP06737 847 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 LYNP07948 512 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 UQCRBP14927 111 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TTPAP49638 278 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 RAD51Q06609 339 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TRIM25Q14258 630 aaKnown RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 REP15Q6BDI9 236 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TTC30BQ8N4P2 665 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 USP13Q92995 863 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms