RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Med20Q9R0X0 212 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Olfr1160A2AVT0 319 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 MttpO08601 894 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Dnmt3bO88509 859 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 IkbkgO88522 412 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Eno3P21550 434 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Fam131bQ3TY60 332 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Trappc9Q3U0M1 1148 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Lrrc8bQ5DU41 803 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Arhgap30Q640N3 1101 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Colgalt2Q6NVG7 625 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Dclk2Q6PGN3 756 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ssx9Q6XAS3 170 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Efr3bQ6ZQ18 817 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Rpp38Q80UU2 280 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Arl5aQ80ZU0 179 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ttc39cQ8VE09 580 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Pcdhga10Q91XY9 930 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Mccc1Q99MR8 717 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Pbx4Q99NE9 378 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ly6kQ9CWP4 154 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Lsm12Q9D0R8 195 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Clec1bQ9JL99 229 aa13.43□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Olfr603L7N1Y4 312 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 F3P20352 294 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Hbq1bQ3U0A6 142 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Zfp217Q3U0X6 1041 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Tead4Q62296 427 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Utp14bQ6EJB6 756 aaKnown RBP13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Tigd3Q7TM95 470 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Olfr366Q7TRY4 309 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Cabcoco1Q8CDT7 208 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Nkiras1Q8CEC5 192 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Snapc1Q8K0S9 389 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Olfr665Q8VG79 316 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Mark1Q8VHJ5 795 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Psip1Q99JF8 528 aaKnown RBP13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Pramel1Q99MW3 458 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Fam136aQ9CR98 138 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Psmd8Q9CX56 353 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 S100pbpQ9D5K4 396 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Pcm1Q9R0L6 2025 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Zscan4bE9Q3G0 505 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Vmn2r44L7N2E1 861 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Sema3aO08665 772 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Klc2O88448 599 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gnao1P18872 354 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ephx2P34914 554 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Tial1P70318 392 aaKnown RBP13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Q3U4G0 281 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 H2-Q2Q4KN81 360 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 9930111J21Rik1Q5SVP0 844 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Il17aQ62386 158 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 DcstampQ7TNJ0 470 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ptk7Q8BKG3 1062 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Znf385bQ8BXJ8 482 aaKnown RBP13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Nlrp10Q8CCN1 673 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Sorcs3Q8VI51 1219 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Creld1Q91XD7 420 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ndc80Q9D0F1 642 aaKnown RBP13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Prpsap1Q9D0M1 356 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Mmp19Q9JHI0 527 aa13.42□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gm12695A2AGB2 545 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Vmn2r115E9Q0E7 857 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Zfp780bE9Q2S6 806 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 LdhcP00342 332 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Zfp607aQ3TQG9 686 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 RhocQ62159 193 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 VwdeQ6DFV8 926 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Bcas1Q80YN3 633 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Adprhl2Q8CG72 370 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Arhgef3Q91X46 524 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 IgtpQ9DCE9 423 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Tdp2Q9JJX7 370 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Rasgrp2Q9QUG9 608 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Grin3aA2AIR5 1135 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Fam43bA2AM80 330 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Pdzd7E9Q9W7 1021 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Hmgxb3G3X9M3 1254 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Nsmce4aG3XA30 381 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Spp1P10923 294 aaKnown RBP13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Srbd1Q497V5 1015 aaKnown RBP13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 ScinQ60604 715 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gpr17Q6NS65 339 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Fads6Q80UG1 342 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Fmo9Q8C116 539 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Pcdh18Q8VHR0 1134 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 DcxrQ91X52 244 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Exoc2Q9D4H1 924 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 4930524N10RikQ9D519 233 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Kctd4Q9D7X1 259 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 CasrQ9QY96 1079 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Dnaja2Q9QYJ0 412 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gpc1Q9QZF2 557 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 VarsQ9Z1Q9 1263 aaKnown RBP13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gria4Q9Z2W8 902 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Malrd1A2AJX4 2123 aa13.41□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gm3604A0A087WPN2 559 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Kdelc2G5E897 503 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Bub1O08901 1058 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms