RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Stx7O70439 261 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 InvsO89019 1062 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Dnmt3cP0DOY1 709 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Klrb1bP27812 223 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fmo5P97872 533 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Eml1Q05BC3 814 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gpr15Q0VDU3 360 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 HexdcQ3U4H6 486 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mapre1Q61166 268 aaKnown RBP9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 TsnQ62348 228 aaKnown RBP9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc13a5Q67BT3 572 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Dna2Q6ZQJ5 1062 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Kirrel2Q7TSU7 700 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pcsk9Q80W65 694 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Sfr1Q8BP27 319 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fam78aQ8C552 283 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Katnbl1Q9CWJ3 299 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tmem80Q9D3H0 123 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Chrnb2Q9ERK7 501 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Htr3bQ9JHJ5 437 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc7a8Q9QXW9 531 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Adam17Q9Z0F8 827 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fpr-rs4A4FUQ5 323 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cylc2B1AWN8 422 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cldn24D3YXJ9 220 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lipo4D3Z608 396 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm8267E9Q207 261 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm7073E9QAS1 335 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Akain1G3UWD5 69 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sema3aO08665 772 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Il1rnP25085 178 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gp1bbP56400 206 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gabrb3P63080 473 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Trpv5P69744 723 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gpatch4Q3TFK5 415 aaKnown RBP9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Znf865Q3U3I9 1058 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Arhgap11aQ80Y19 987 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 TufmQ8BFR5 452 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sema3dQ8BH34 777 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Trpv3Q8K424 791 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rsph1Q8VIG3 301 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pycr2Q922Q4 320 aaKnown RBP9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Oas1cQ924S2 362 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cmc1Q9CPZ8 106 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lrrc40Q9CRC8 602 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sh2d4aQ9D7V1 421 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Carm1Q9WVG6 608 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm28363A0A087WQW2 129 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 6720489N17RikA0A1Y7VJW0 127 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ism2D3Z6A3 493 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Galntl6E5D8G1 601 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp780bE9Q2S6 806 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cyp2b23E9Q593 491 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn1r76F8VQ63 324 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pot1bH7BX60 640 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sdc4O35988 198 aaKnown RBP9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Atxn1lP0C7T6 687 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vps26aP40336 327 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Stt3aP46978 705 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PamP97467 979 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 CtscP97821 462 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp607aQ3TQG9 686 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam35aQ3UEN2 891 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zyg11bQ3UFS0 744 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vsx2Q61412 361 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rslcan18Q7M6X5 460 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Amigo2Q80ZD9 519 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cept1Q8BGS7 416 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nod1Q8BHB0 953 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tgm6Q8BM11 706 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zbtb8bQ8CII0 484 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Plcl2Q8K394 1128 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 IlkapQ8R0F6 392 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Arhgef3Q91X46 524 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gjd3Q91YD1 278 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Scd3Q99PL7 359 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sugt1Q9CX34 336 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kif12Q9D2Z8 642 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hipk3Q9ERH7 1192 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 AgkQ9ESW4 421 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cldn19Q9ET38 224 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Il17rbQ9JIP3 499 aa9.71□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Akap17bA2A3V1 959 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nipsnap3aB1AWZ3 247 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Phf11bB4XVQ1 276 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Edil3O35474 480 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gnrh1P13562 90 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 GhrP16882 650 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 BrafP28028 804 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ppp3cbP48453 525 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lim2P56563 173 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Naa20P61600 178 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pld2P97813 933 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm4951Q3UED7 406 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pdap1Q3UHX2 181 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Six4Q61321 775 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ddx4Q61496 702 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 ScapQ6GQT6 1276 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ces2bQ6PDB7 556 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cd300lfQ6SJQ7 337 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms