RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Stk25Q9Z2W1 426 aa9.93□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Hpcal1P62748 193 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Smim24Q0VG18 120 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Serpina3gQ5I2A0 440 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cldn11Q60771 207 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Efr3aQ8BG67 819 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Spon2Q8BMS2 330 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tab1Q8CF89 502 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Adgrg1Q8K209 687 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rell1Q8K2J7 272 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 SarafQ8R3Q0 334 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mcoln3Q8R4F0 553 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 SncaipQ99ME3 962 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Khdc3Q9CWU5 440 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Q9CXL3 195 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 DpysQ9EQF5 519 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 CtsmQ9JL96 333 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cntn6Q9JMB8 1028 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Map2k5Q9WVS7 448 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vmn1r2A2AMT6 306 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fbxl18E9PYR1 771 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kbtbd2G3X9X1 623 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ikzf3O08900 507 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 PbsnO08976 174 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Anxa3O35639 323 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Bnc1O35914 961 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ctbp1O88712 441 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 VegfaQ00731 214 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Hk3Q3TRM8 922 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zmat1Q3V0C1 714 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tssk1bQ61241 365 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rbl1Q64701 1063 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rps9Q6ZWN5 194 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Olfr867Q7TRF3 331 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Olfr533Q7TRT7 320 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Aoc2Q812C9 757 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fbxw21Q8BI38 468 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ctxn3Q8BXZ0 80 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Usp45Q8K387 813 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Wnt9aQ8R5M2 365 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ptbp2Q91Z31 531 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fam212aQ9CX62 282 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Hnrnpa0Q9CX86 305 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Izumo2Q9DA16 220 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Nif3l1Q9EQ80 376 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Map3k14Q9WUL6 942 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Peak1Q69Z38 1735 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Nipsnap3aB1AWZ3 247 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Trim30bE9PVL6 203 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 LatO54957 242 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc2a2P14246 523 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Msx2Q03358 267 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dennd5aQ6PAL8 1287 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rbm4Q8C7Q4 361 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rbm4bQ8VE92 357 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pcdhga10Q91XY9 930 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zcchc12Q9CZA5 402 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lsm12Q9D0R8 195 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mrps15Q9DC71 258 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp3a44Q9EQW4 504 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Shank3Q4ACU6 1730 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Nup188Q6ZQH8 1759 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Myh13B1AR69 1938 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Myh6Q02566 1938 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 PpigA2AR02 752 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vmn2r15L7N2A0 855 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 GnazO70443 355 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Anxa6P14824 673 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rpl3P27659 403 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 IdsQ08890 552 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cpne7Q0VE82 557 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cd300lgQ1ERP8 331 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Q5XFZ0 217 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ttyh3Q6P5F7 524 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 GnasQ6R0H7 1133 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Efr3bQ6ZQ18 817 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Plekha6Q7TQG1 1173 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Npas4Q8BGD7 802 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cnksr3Q8BMA3 555 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lsm14aQ8K2F8 462 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Chrna3Q8R4G9 499 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pcdhgb2Q91XX7 928 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc44a3Q921V7 656 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Spg21Q9CQC8 308 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc25a11Q9CR62 314 aaKnown RBP9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 SqorQ9R112 450 aa9.92□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zmynd12A2BGJ5 363 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm21293E9Q4G9 266 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kif1cO35071 1100 aaKnown RBP9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fkbp7O54998 218 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 LdhcP00342 332 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cbx3P23198 183 aaKnown RBP9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tuba4aP68368 448 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ctnnb1Q02248 781 aaKnown RBP9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Aarsd1Q3THG9 412 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zdhhc18Q5Y5T2 380 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Q8BH50 245 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rmdn2Q8BSE0 410 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc5a9Q8VDT1 685 aa9.91□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gemin2Q9CQQ4 269 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms