RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 SfpqQ8VIJ6 699 aaKnown RBP11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Pcdhga6Q91XY2 932 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Edem1Q925U4 652 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Bbs2Q9CWF6 721 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 CinpQ9D0V8 212 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 S100pbpQ9D5K4 396 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Rexo2Q9D8S4 237 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Cts8Q9JI81 333 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Cbx8Q9QXV1 362 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 ArntlQ9WTL8 632 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Asb1Q9WV74 336 aa11.34□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 FscbA1EGX6 1074 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 TprnA2AI08 749 aaKnown RBP11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Scgb2b7D3YYY1 112 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Zfp963D3Z2T8 383 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Epha8O09127 1004 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 NmbrO54799 390 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 CrymO54983 313 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tlx3O55144 291 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ap2a1P17426 977 aaKnown RBP11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Lmnb2P21619 596 aaKnown RBP11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Atxn10P28658 475 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Akr1b8P45377 316 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ypel5P62700 121 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Lhx1P63006 406 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 AurkaP97477 395 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Pde1bQ01065 535 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Msto1Q2YDW2 556 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fam131bQ3TY60 332 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Mfsd3Q5U419 412 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 FntaQ61239 377 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Drd1Q61616 446 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sohlh1Q6IUP1 357 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Foxo6Q70KY4 559 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ccnt2Q7TQK0 723 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Olfr834Q7TRG8 312 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gtf3c4Q8BMQ2 817 aaKnown RBP11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Maats1Q8BRC6 783 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sfrp1Q8C4U3 314 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cep57Q8CEE0 500 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Mill1Q8HWE7 395 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fnbp1lQ8K012 605 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Scamp1Q8K021 338 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fam13bQ8K2H3 851 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ccdc12Q8R344 166 aaKnown RBP11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cys1Q8R4T1 145 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rab7bQ8VEA8 199 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Olfr448Q8VES9 310 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Olfr1208Q8VG47 308 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cdhr1Q8VHP6 859 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Bag2Q91YN9 210 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 TfQ921I1 697 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 NapgQ9CWZ7 312 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 3300002I08RikQ9CXH3 147 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fam227aQ9D3V8 625 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cdyl2Q9D5D8 503 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tbc1d21Q9D9D3 336 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Zswim2Q9D9X6 631 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fstl3Q9EQC7 256 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gpc1Q9QZF2 557 aa11.33□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Igkv6-20A0A140T8P2 115 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gm12248A0A1W2P8B8 313 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Armc4B2RY50 1037 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gm20390E9PZF0 267 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Slc32a1O35633 525 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 ChkbO55229 394 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 P01670 111 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 P01671 111 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 P01672 111 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Tcp1P11983 556 aaKnown RBP11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Klk1b26P36369 261 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gad2P48320 585 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Opa1P58281 960 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rab6bP61294 208 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rps3P62908 243 aaKnown RBP11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Nucb2P81117 420 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ap2m1P84091 435 aaKnown RBP11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Npas2P97460 816 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Nme2Q01768 152 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Cdk18Q04899 451 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Lingo4Q149C3 593 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 CdonQ32MD9 1250 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Gpr165Q3V3A3 455 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Afap1l2Q5DTU0 825 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Prr18Q6PAN7 307 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 PapolgQ6PCL9 739 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ip6k1Q6PD10 433 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Olfr1355Q7TQU9 310 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Arl5aQ80ZU0 179 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Trim6Q8BGE7 488 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Ap5m1Q8BJ63 490 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 SgtaQ8BJU0 315 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Etf1Q8BWY3 437 aaKnown RBP11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rdh1Q8CGV4 317 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Nfatc4Q8K120 901 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Rnf219Q8K2Y0 722 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 MpstQ99J99 297 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Fam69bQ99ML4 431 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 CoprsQ9CQ13 173 aa11.32□□□□□ -0.6
Ccdc28b-201ENSMUST00000030586 Sar1bQ9CQC9 198 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms