RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	PLA2G16	P53816	162 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	HUNK	P57058	714 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	YWHAZ	P63104	245 aa	Known RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	MRPS15	P82914	257 aa	Known RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CLC	Q05315	142 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF252P-AS1	Q0IIN9	211 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	TAF5	Q15542	800 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	MAPRE2	Q15555	327 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ANO4	Q32M45	955 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	XAF1	Q6GPH4	301 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC16A12	Q6ZSM3	486 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	OTOP3	Q7RTS5	596 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ZBTB46	Q86UZ6	589 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	LYSMD2	Q8IV50	215 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	C10orf107	Q8IVU9	208 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	WDTC1	Q8N5D0	677 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	BPIFB6	Q8NFQ5	453 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	OR2T34	Q8NGX1	318 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	OR2T3	Q8NH03	318 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ACTL9	Q8TC94	416 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CYGB	Q8WWM9	190 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	PPWD1	Q96BP3	646 aa	Known RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	DACH2	Q96NX9	599 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	TWNK	Q96RR1	684 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CNPY3	Q9BT09	278 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ZBTB26	Q9HCK0	441 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ABI2	Q9NYB9	513 aa	Predicted RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ADA2	Q9NZK5	511 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CPA4	Q9UI42	421 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	VANGL2	Q9ULK5	521 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CROCC	Q5TZA2	2017 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	HMX2	A2RU54	273 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	C17orf102	A2RUQ5	167 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	AQP12B	A6NM10	295 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306		F8VP50	259 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	HAS3	O00219	553 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	DPYSL4	O14531	572 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	ENPP3	O14638	875 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	SYNCRIP	O60506	623 aa	Known RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TRAPPC2	P0DI81	140 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TRAPPC2B	P0DI82	140 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	CYP3A5	P20815	502 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	IL10	P22301	178 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	SCNN1A	P37088	669 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	MAGEA6	P43360	314 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	PTPN9	P43378	593 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	CDH8	P55286	799 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	ADARB1	P78563	741 aa	Known RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	STX5	Q13190	355 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TOP3A	Q13472	1001 aa	Predicted RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TFDP2	Q14188	446 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TAZ	Q16635	292 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	GOLGA7B	Q2TAP0	167 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	SV2C	Q496J9	727 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	SAMD4B	Q5PRF9	694 aa	Known RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	BRMS1L	Q5PSV4	323 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	ATAD3C	Q5T2N8	411 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TAF2	Q6P1X5	1199 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	HACD2	Q6Y1H2	254 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	KCTD20	Q7Z5Y7	419 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	HORMAD1	Q86X24	394 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	RASAL3	Q86YV0	1011 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	AQP12A	Q8IXF9	295 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	BEND7	Q8N7W2	519 aa	Predicted RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	OR6F1	Q8NGZ6	308 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	MUL1	Q969V5	352 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	CENPN	Q96H22	339 aa	Predicted RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	CEP19	Q96LK0	163 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	OR52B2	Q96RD2	323 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	CPXM1	Q96SM3	734 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	PTPN18	Q99952	460 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TMEM246	Q9BRR3	403 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	FUNDC2	Q9BWH2	189 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	RSAD1	Q9HA92	442 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	SMYD2	Q9NRG4	433 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	SMPD3	Q9NY59	655 aa	Predicted RBP	10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	CD300A	Q9UGN4	299 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	HMGXB4	Q9UGU5	601 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	ATPIF1	Q9UII2	106 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	VWA7	Q9Y334	891 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	PCDHGA7	Q9Y5G6	932 aa		10.77	□□□□□ -0.69
CHD2-223	ENST00000636306	TCAF2	A6NFQ2	919 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	GPR32	O75388	356 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	LRCH4	O75427	683 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	TIPRL	O75663	272 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	MFN2	O95140	757 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	DLGAP3	O95886	979 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	MYL3	P08590	195 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	CSH1	P0DML2	217 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	CSH2	P0DML3	217 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	TCN1	P20061	433 aa	Predicted RBP	10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	FAS	P25445	335 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	PRIM2	P49643	509 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	ZNF143	P52747	638 aa	Predicted RBP	10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	CRYBB1	P53674	252 aa	Predicted RBP	10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	GDF10	P55107	478 aa		10.76	□□□□□ -0.69
CHD2-223	ENST00000636306	BNC1	Q01954	994 aa		10.76	□□□□□ -0.69

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