RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 V9GYQ6 96 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 AGRPO00253 132 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 AURKAO14965 403 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 JCHAINP01591 159 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 CXCL10P02778 98 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 HMBSP08397 361 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 BMXP51813 675 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 DPYSL2Q16555 572 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 PPP1R3AQ16821 1122 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 CNKSR3Q6P9H4 555 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 ARHGAP36Q6ZRI8 547 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZDHHC17Q8IUH5 632 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZC3H7AQ8IWR0 971 aaKnown RBP11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 SIX5Q8N196 739 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 KYQ8NBH2 561 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 TTPALQ9BTX7 342 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 ELAC1Q9H777 363 aaKnown RBP11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 POLR1BQ9H9Y6 1135 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 WDR41Q9HAD4 459 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 STK39Q9UEW8 545 aa11.79□□□□□ -0.52
PPP4R3B-204ENST00000612688 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 A0A1W2PQ67 120 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TTC24A2A3L6 582 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 NFKB1P19838 968 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TYMPP19971 482 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TPSB2P20231 275 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 MAP4P27816 1152 aaKnown RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZBTB17Q13105 803 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 PLCL1Q15111 1095 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 SF3B4Q15427 424 aaKnown RBP eCLIP11.78□□□□□ -0.528e-10■□□□□ 9.9
PPP4R3B-204ENST00000612688 TPSAB1Q15661 275 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 SLC25A52Q3SY17 297 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 EPGNQ6UW88 154 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 LDB1Q86U70 411 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TICAM1Q8IUC6 712 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 OR9I1Q8NGQ6 314 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 DHRS1Q96LJ7 313 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 SERPINI1Q99574 410 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 ACE2Q9BYF1 805 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 CCDC167Q9P0B6 97 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 CXXC1Q9P0U4 656 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 STAP1Q9ULZ2 295 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 PRUNE2Q8WUY3 3088 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 EEF2KO00418 725 aaKnown RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 SCAMP3O14828 347 aaKnown RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 HOXA2O43364 376 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TIMP1P01033 207 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 MT-ND1P03886 318 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 ERCC2P18074 760 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TFEBP19484 476 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 NOS2P35228 1153 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 PPARGP37231 505 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 MAPRE1Q15691 268 aaKnown RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 GPR180Q86V85 440 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 KCNMB4Q86W47 210 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 FIBCD1Q8N539 461 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 BADQ92934 168 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 PHF21BQ96EK2 531 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 VPS39Q96JC1 886 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 MRPL9Q9BYD2 267 aaKnown RBP11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 CNGB3Q9NQW8 809 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 SLC2A6Q9UGQ3 507 aa11.78□□□□□ -0.52
PPP4R3B-204ENST00000612688 CHD9Q3L8U1 2897 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 A0A1W2PQH9 124 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZNF839A8K0R7 811 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 CFAP99D6REC4 459 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 TRIM13O60858 407 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 OAZ2O95190 189 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 PMS2P3Q13401 168 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 SPIDRQ14159 915 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 RGS21Q2M5E4 152 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 ZBTB49Q6ZSB9 765 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 C7orf61Q8IZ16 206 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 ADCY4Q8NFM4 1077 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 BPIFB6Q8NFQ5 453 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 KCTD13Q8WZ19 329 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 BORCS5Q969J3 196 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 NXNL1Q96CM4 212 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 LRRC39Q96DD0 335 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 SPATA17Q96L03 361 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 PKMYT1Q99640 499 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 MARCH7Q9H992 704 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 TNFRSF12AQ9NP84 129 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 OLAHQ9NV23 265 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.52
PPP4R3B-204ENST00000612688 B4GAT1O43505 415 aa11.77□□□□□ -0.53
PPP4R3B-204ENST00000612688 VAPBO95292 243 aa11.77□□□□□ -0.53
PPP4R3B-204ENST00000612688 MAGP20916 626 aa11.77□□□□□ -0.53
PPP4R3B-204ENST00000612688 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.53
PPP4R3B-204ENST00000612688 USP41Q3LFD5 358 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms