RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 EVPLLA8MZ36 301 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PURAQ00577 322 aaKnown RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 ZNF33AQ06730 810 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 TRAF2Q12933 501 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 DDX39BQ13838 428 aaKnown RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 ZIK1Q3SY52 487 aaPredicted RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 UBXN11Q5T124 520 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 GDF6Q6KF10 455 aaPredicted RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 C14orf80Q86SX3 495 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 KBTBD2Q8IY47 623 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 OR7D4Q8NG98 312 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 ITFG1Q8TB96 612 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 ESAMQ96AP7 390 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 TSGA13Q96PP4 275 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 CDK5RAP1Q96SZ6 601 aaKnown RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 TBCDQ9BTW9 1192 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 AGO1Q9UL18 857 aaKnown RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 KCTD3Q9Y597 815 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 ARL5AQ9Y689 179 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 CCDC162PA2VCL2 907 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 CAPN15O75808 1086 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 MYO1DO94832 1006 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PRKCGP05129 697 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 CKMT2P17540 419 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 IMPDH1P20839 514 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 FLT3LGP49771 235 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 MAPK10P53779 464 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 NUP107P57740 925 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 CLCQ05315 142 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 HS6ST3Q8IZP7 471 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 OR13C4Q8NGS5 318 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 ASB9Q96DX5 294 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 B3GALT6Q96L58 329 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 TM6SF2Q9BZW4 377 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 SENP6Q9GZR1 1112 aaPredicted RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 SMOC2Q9H3U7 446 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 GTF2IRD1Q9UHL9 959 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 SLC45A1Q9Y2W3 748 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 SH3BP1Q9Y3L3 701 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 NPEPPSL1A6NEC2 478 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SEC22BO75396 215 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SLC22A3O75751 556 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 GABBR2O75899 941 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 MT-ND1P03886 318 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CYBBP04839 570 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CKMP06732 381 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 HDCP19113 662 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 MC4RP32245 332 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 MTA1Q13330 715 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CEACAM7Q14002 265 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 KCNA10Q16322 511 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 LDLRAD1Q5T700 205 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CBR4Q8N4T8 237 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 ZNF276Q8N554 614 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 C2CD4AQ8NCU7 369 aaPredicted RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 ACVR1CQ8NER5 493 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CLK4Q9HAZ1 481 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 PARVBQ9HBI1 364 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 FBRSL1Q9HCM7 1045 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 PCDHB8Q9UN66 801 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SLC8A2Q9UPR5 921 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 MBLAC1A4D2B0 266 aaPredicted RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 SDHDO14521 159 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 FFAR3O14843 346 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 GPR42O15529 346 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 BCAS2O75934 225 aaPredicted RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 PCNAP12004 261 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 TYMPP19971 482 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 TACR2P21452 398 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 LCP2Q13094 533 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 ITGA7Q13683 1181 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 C16orf72Q14CZ0 275 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 TSNQ15631 228 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 HECTD3Q5T447 861 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 FBXL22Q6P050 247 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 HBEGFQ99075 208 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 KLQ9UEF7 1012 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 DMTF1Q9Y222 760 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 PCDHB9Q9Y5E1 797 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 PCDHGC4Q9Y5F7 938 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 PHIPQ8WWQ0 1821 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 A0A0U1RQF3 1178 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CCDC189A1A4V9 331 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CNTN5O94779 1100 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 PKMP14618 531 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 TUFMP49411 452 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 AFF1P51825 1210 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 IL10RBQ08334 325 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 VAC14Q08AM6 782 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 PPP1R3AQ16821 1122 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SIRPB2Q5JXA9 342 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 VARS2Q5ST30 1063 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 ARMC12Q5T9G4 340 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 RETSATQ6NUM9 610 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SH2D5Q6ZV89 423 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SLC24A5Q71RS6 500 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 CPSF7Q8N684 471 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms