RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NIPAL4Q0D2K0 466 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ELP6Q0PNE2 266 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 PRPSAP1Q14558 356 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 TPSAB1Q15661 275 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 NEK5Q6P3R8 708 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ARMCX6Q7L4S7 300 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ARRDC2Q8TBH0 407 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ECHDC3Q96DC8 303 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 LRRC39Q96DD0 335 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 PGM2Q96G03 612 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 GPR174Q9BXC1 333 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 GBA3Q9H227 469 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 USP29Q9HBJ7 922 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 XAB2Q9HCS7 855 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 SAYSD1Q9NPB0 183 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 PSD3Q9NYI0 1048 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 MBD1Q9UIS9 605 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 RPL26L1Q9UNX3 145 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 RAI2Q9Y5P3 530 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ABCA7Q8IZY2 2146 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 AP3B1O00203 1094 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 NEMP1O14524 444 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 TSPAN6O43657 245 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 GJB3O75712 270 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ANXA9O76027 345 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 PGLSO95336 258 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 AGTP01019 485 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 GSTA2P09210 222 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ACSL1P33121 698 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 NUDT1P36639 197 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 DPP6P42658 865 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 PTGER3P43115 390 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 SKOR1P84550 965 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 TRAF2Q12933 501 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 SLC29A2Q14542 456 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 UGP2Q16851 508 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 KLHL38Q2WGJ6 581 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ANKRD20A2Q5SQ80 823 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 SYCP2LQ5T4T6 812 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ANKRD20A1Q5TYW2 823 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ANKRD20A3Q5VUR7 823 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 CYP2U1Q7Z449 544 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 TTC7BQ86TV6 843 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 VOPP1Q96AW1 172 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ADGRE3Q9BY15 652 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 C10orf88Q9H8K7 445 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 CNOT10Q9H9A5 744 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 EIF2B3Q9NR50 452 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 RAB6BQ9NRW1 208 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 PHTF1Q9UMS5 762 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-220ENST00000581737 TBC1D3DA0A087WVF3 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3IA0A087WXS9 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3EA0A087X179 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3KA0A087X1G2 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TTC24A2A3L6 582 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3FA6NER0 549 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 ERI2A8K979 691 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 MEI4A8MW99 385 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3LB9A6J9 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 PLK4O00444 970 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 PSMD3O43242 534 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TCEA3O75764 348 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 ACSL3O95573 720 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 MMP2P08253 660 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3HP0C7X1 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 ZSCAN5DPP0CG00 497 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TIMP2P16035 220 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 CD68P34810 354 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 ABL2P42684 1182 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 MAGEA6P43360 314 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 CCR5P51681 352 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 EPHB1P54762 984 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 GEMP55040 296 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 GDF10P55107 478 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 PDIA2Q13087 525 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 MPP3Q13368 585 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TRIM61Q5EBN2 209 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 KIAA0895LQ68EN5 471 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3GQ6DHY5 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3CQ6IPX1 549 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 KIAA1161Q6NSJ0 714 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 USP45Q70EL2 814 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TMEFF1Q8IYR6 380 aa13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 TBC1D3Q8IZP1 549 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-220ENST00000581737 NAT8LQ8N9F0 302 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms