RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SLC39A8Q9C0K1 460 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 ATP13A3Q9H7F0 1226 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 PHPT1Q9NRX4 125 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 PDP2Q9P2J9 529 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 B4GALT6Q9UBX8 382 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 GOLGA6CA6NDK9 693 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 GOLGA6BA6NDN3 693 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 TRAFD1O14545 582 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 PRAMEF11O60813 436 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 PALMO75781 387 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 STK17BO94768 372 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 CYP1A1P04798 512 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 FURINP09958 794 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 GOLGA6DP0CG33 693 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 RNF224P0DH78 156 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 KRT3P12035 628 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 CHRNB2P17787 502 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 GPD1P21695 349 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ETV3P41162 512 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ACTR1BP42025 376 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 CSNK1DP48730 415 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 PAPOLAP51003 745 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 SCNN1BP51168 640 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ACTR1AP61163 376 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 CDK3Q00526 305 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ABHD18Q0P651 414 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ERV3-1Q14264 604 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 PTPRRQ15256 657 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 VWA3BQ502W6 1294 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 HSP90AA4PQ58FG1 418 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 FHL5Q5TD97 284 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 DOK6Q6PKX4 331 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ARHGAP36Q6ZRI8 547 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ARHGAP22Q7Z5H3 698 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 EPS8L1Q8TE68 723 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 NUS1Q96E22 293 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 AHCYL2Q96HN2 611 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 TEFMQ96QE5 360 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 SLC38A3Q99624 504 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 EFHD1Q9BUP0 239 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 NDST4Q9H3R1 872 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 LRRC19Q9H756 370 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 CATSPERBQ9H7T0 1116 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 GOLGA6AQ9NYA3 693 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 KLHL3Q9UH77 587 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 FZD10Q9ULW2 581 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 TMEM98Q9Y2Y6 226 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 KCNMB2Q9Y691 235 aa10.09□□□□□ -0.79
NPLOC4-220ENST00000576940 A0A0U1RQS6 177 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 CCP110O43303 1012 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 GADD45BO75293 160 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 SEMA7AO75326 666 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 VPS4BO75351 444 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 EML2O95834 649 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 PDGFAP04085 211 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 UCHL3P15374 230 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 COL8A1P27658 744 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 GPLD1P80108 840 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 MC1RQ01726 317 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 FMO1Q01740 532 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 NSUN2Q08J23 767 aaKnown RBP eCLIP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 PTP4A2Q12974 167 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 CNGA3Q16281 694 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 MAN2A1Q16706 1144 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 MIIPQ5JXC2 388 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 CAPRIN2Q6IMN6 1127 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 TCTN3Q6NUS6 607 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 CEACAM20Q6UY09 585 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 RFLNAQ6ZTI6 216 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 ASB18Q6ZVZ8 466 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 HSD11B1LQ7Z5J1 315 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 TMEM135Q86UB9 458 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 CCDC13Q8IYE1 715 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 CBARPQ8N350 705 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 FNIP1Q8TF40 1166 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 NCSTNQ92542 709 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 PCDHB18PQ96TA0 734 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 DPYSL5Q9BPU6 564 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 SELENOOQ9BVL4 669 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 STK33Q9BYT3 514 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 PRDM8Q9NQV8 689 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 FBXO8Q9NRD0 319 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 NOCTQ9UK39 431 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 TLK1Q9UKI8 766 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 VPS4AQ9UN37 437 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 SLC17A4Q9Y2C5 497 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 TMEM184BQ9Y519 407 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
NPLOC4-220ENST00000576940 ITPR2Q14571 2701 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 CSMD1Q96PZ7 3565 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 A1L4Q6 167 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 ENO4A6NNW6 628 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 TTLL8A6PVC2 850 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 F8VZ95 297 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 POLR1CO15160 346 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 GFPT2O94808 682 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 HEXIM1O94992 359 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 DLGAP3O95886 979 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms