RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GPR83Q9NYM4 423 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 SH3BGRL2Q9UJC5 107 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 VPS28Q9UK41 221 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 PCDHA7Q9UN72 937 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 G3BP2Q9UN86 482 aaKnown RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 CLIC4Q9Y696 253 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 WASF2Q9Y6W5 498 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 IGHV1OR21-1A0A087WYE8 117 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 FRMD3A2A2Y4 597 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 FANCGO15287 622 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 PPM1DO15297 605 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 SNAP91O60641 907 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 PEX14O75381 377 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 TM7SF2O76062 418 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 KIAA0754O94854 1291 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 TRIM49P0CI25 452 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 TRIM49CP0CI26 452 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 GPR3P46089 330 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 PPM1FP49593 454 aaPredicted RBP6.92□□□□□ -1.3
CHD3-213ENST00000571249 VAMP7P51809 220 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 SLC8A3P57103 927 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 COPS2P61201 443 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 DHX9Q08211 1270 aaKnown RBP6.92□□□□□ -1.3
CHD3-213ENST00000571249 PWP1Q13610 501 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 STK38Q15208 465 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 IRF4Q15306 451 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 ASIC2Q16515 512 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 RILPL1Q5EBL4 403 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 XKRXQ6PP77 449 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 C17orf82Q86X59 251 aaPredicted RBP6.92□□□□□ -1.3
CHD3-213ENST00000571249 ZNF761Q86XN6 746 aaPredicted RBP6.92□□□□□ -1.3
CHD3-213ENST00000571249 ULK2Q8IYT8 1036 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 FMR1NBQ8N0W7 255 aaPredicted RBP6.92□□□□□ -1.3
CHD3-213ENST00000571249 SIX6OS1Q8N1H7 587 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 KIAA1524Q8TCG1 905 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 ZDHHC1Q8WTX9 485 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 OR1E3Q8WZA6 343 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 STAMBPL1Q96FJ0 436 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 AK8Q96MA6 479 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 TIGD1Q96MW7 591 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 APOOQ9BUR5 198 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 C1QTNF7Q9BXJ2 289 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 TMEM168Q9H0V1 697 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 PDP2Q9P2J9 529 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 SUCOQ9UBS9 1254 aaKnown RBP6.92□□□□□ -1.3
CHD3-213ENST00000571249 MAPK8IP1Q9UQF2 711 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 HPSEQ9Y251 543 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 HS3ST2Q9Y278 367 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 OR1A2Q9Y585 309 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 OR51B4Q9Y5P0 310 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 DGKBQ9Y6T7 804 aa6.92□□□□□ -1.3
CHD3-213ENST00000571249 PIKFYVEQ9Y2I7 2098 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 C16orf96A6NNT2 1141 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 LRRIQ3A6PVS8 624 aaPredicted RBP6.91□□□□□ -1.3
CHD3-213ENST00000571249 F5H5T6 163 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 CUTAO60888 179 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 JRKO75564 520 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ECEL1O95672 775 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 FGF1P05230 155 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 LCP1P13796 627 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 TIMP2P16035 220 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 HOXD13P35453 343 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ETFBP38117 255 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ME1P48163 572 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 AP3M2P53677 418 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 KRT83P78385 493 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 LAMB3Q13751 1172 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 INPP5AQ14642 412 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ARL6IP4Q66PJ3 421 aaKnown RBP6.91□□□□□ -1.3
CHD3-213ENST00000571249 RPTNQ6XPR3 784 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 Q6ZS92 163 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 RELL1Q8IUW5 271 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 FAM186BQ8IYM0 893 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ALDH16A1Q8IZ83 802 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ANKRD52Q8NB46 1076 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 XXYLT1Q8NBI6 393 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 ATL2Q8NHH9 583 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 SEC14L1Q92503 715 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 RAB7BQ96AH8 199 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 SLC39A13Q96H72 371 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 WDR92Q96MX6 357 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 TRAPPC9Q96Q05 1148 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 TREX2Q9BQ50 279 aaPredicted RBP6.91□□□□□ -1.3
CHD3-213ENST00000571249 HEPHQ9BQS7 1158 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 DNAI2Q9GZS0 605 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 TNMDQ9H2S6 317 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 GOLPH3LQ9H4A5 285 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 AGPAT3Q9NRZ7 376 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 KBTBD4Q9NVX7 518 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 KLHL3Q9UH77 587 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 PADI1Q9ULC6 663 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 PLEKHA6Q9Y2H5 1048 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 PCDHGC4Q9Y5F7 938 aa6.91□□□□□ -1.3
CHD3-213ENST00000571249 HRNRQ86YZ3 2850 aaPredicted RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 SSU72P8A0A1W2PR75 194 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 TCAF2A6NFQ2 919 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 TMEM202A6NGA9 273 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 C21orf140B9A014 251 aa6.9□□□□□ -1.3
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