RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 SIRPB2Q5JXA9 342 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 CCDC70Q6NSX1 233 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 RFLNAQ6ZTI6 216 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 KANSL1Q7Z3B3 1105 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 PARGQ86W56 976 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 NAXDQ8IW45 347 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 KLHDC8BQ8IXV7 354 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 RAVER1Q8IY67 606 aaKnown RBP9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 PELI3Q8N2H9 469 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 MAIP1Q8WWC4 291 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 RTP4Q96DX8 246 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 APOOQ9BUR5 198 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 CAAP1Q9H8G2 361 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 MAGEE1Q9HCI5 957 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 ZKSCAN5Q9Y2L8 839 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 AAR2Q9Y312 384 aaKnown RBP9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 OR1A2Q9Y585 309 aa9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 ASCC3Q8N3C0 2202 aaKnown RBP9.58□□□□□ -0.88
HCCAT5-201ENST00000569990 TP53BP1Q12888 1972 aaPredicted RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 FLRT2O43155 660 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 METTL18O95568 372 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 CSF2P04141 144 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ITGAVP06756 1048 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 HOXC4P09017 264 aaPredicted RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 NME1P15531 152 aaKnown RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 HLA-DPA1P20036 260 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 GRK6P43250 576 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 TNNT3P45378 269 aaPredicted RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SPINT3P49223 89 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 DPTQ07507 201 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 BNIP3Q12983 259 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 EIF2B5Q13144 721 aaKnown RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SNX1Q13596 522 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PTK2BQ14289 1009 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PRPSAP1Q14558 356 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 NFATC4Q14934 902 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SUZ12Q15022 739 aaKnown RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SLC1A5Q15758 541 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 CCNG2Q16589 344 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 LONRF2Q1L5Z9 754 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PARP6Q2NL67 630 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ZNF542PQ5EBM4 170 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PNCKQ6P2M8 343 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 DRICH1Q6PGQ1 229 aaPredicted RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 THSD4Q6ZMP0 1018 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 MACC1Q6ZN28 852 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ARHGEF18Q6ZSZ5 1173 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ZNF765Q7L2R6 523 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 GATAD2AQ86YP4 633 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 NRSN1Q8IZ57 195 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SLC25A41Q8N5S1 370 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 DEFB124Q8NES8 71 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 CCHCR1Q8TD31 782 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SAP25Q8TEE9 199 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SCAMP4Q969E2 229 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 FUBP1Q96AE4 644 aaKnown RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 EID2BQ96D98 161 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PBKQ96KB5 322 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 CAMK1GQ96NX5 476 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PPP1R2P1Q96PQ5 205 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SRPK1Q96SB4 655 aaKnown RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 FSD1LQ9BXM9 530 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ABCG8Q9H221 673 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 WDR26Q9H7D7 661 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ZFYVE1Q9HBF4 777 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 DNAJC28Q9NX36 388 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 KLF15Q9UIH9 416 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 PNMA8BQ9ULN7 279 aaPredicted RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 TTC7AQ9ULT0 858 aaPredicted RBP9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SNX12Q9UMY4 172 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SHOC2Q9UQ13 582 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ZNF148Q9UQR1 794 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 BTBD3Q9Y2F9 522 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 ZNF711Q9Y462 761 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 SPO11Q9Y5K1 396 aa9.57□□□□□ -0.88
HCCAT5-201ENST00000569990 RGSL1A5PLK6 1076 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 CACNB4O00305 520 aaPredicted RBP9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 GIPC1O14908 333 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 AURKAO14965 403 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 SDC3O75056 442 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 CBFA2T3O75081 653 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 PIAS2O75928 621 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 KCNK5O95279 499 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 SOD1P00441 154 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 AGTP01019 485 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 FGF1P05230 155 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 CEACAM1P13688 526 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 TSHRP16473 764 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 DGKAP23743 735 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 HTR1BP28222 390 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 TEAD1P28347 426 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 ADRA1AP35348 466 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 NOVA1P51513 510 aaKnown RBP9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 KIAA1024LP59773 190 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 GNG11P61952 73 aa9.56□□□□□ -0.88
HCCAT5-201ENST00000569990 HNRNPKP61978 463 aaKnown RBP eCLIP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms