RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SPAARA0A1B0GVQ0 90 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 A0A1W2PQ67 120 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 MED19A0JLT2 244 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 NEMP2A6NFY4 417 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 WASH4PA8MWX3 477 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 UPK3BL1B0FP48 263 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 UPK3BL2E5RIL1 263 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 J3KR12 359 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 TLR4O00206 839 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CDX4O14627 284 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 KCNK3O14649 394 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 APOL1O14791 398 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PPP1R12AO14974 1030 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 FFAR2O15552 330 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SH3BP5O60239 455 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PRAMEF11O60813 436 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SDC3O75056 442 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ZMPSTE24O75844 475 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PAK4O96013 591 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PCCBP05166 539 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 IGHV4-34P06331 123 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CTSLP07711 333 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ELFN1P0C7U0 828 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 THEGLP0DJG4 465 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CYP2A6P11509 494 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 RAB6AP20340 208 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CSRP1P21291 193 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 IL1R2P27930 398 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 HTR1BP28222 390 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 HNRNPH3P31942 346 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 GKP32189 559 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 MAN1A1P33908 653 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ARHGAP25P42331 645 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SLC1A1P43005 524 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 MMP13P45452 471 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 RABIFP47224 123 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 HCAR3P49019 387 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SUOXP51687 545 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF75DP51815 510 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 AP1S1P61966 158 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 DYNLT1P63172 113 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 IL10RBQ08334 325 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 AP1B1Q10567 949 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PTK2BQ14289 1009 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ACOX1Q15067 660 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 TRIP6Q15654 476 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PIP5KL1Q5T9C9 394 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 MARC1Q5VT66 337 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 KAZNQ674X7 775 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CCDC70Q6NSX1 233 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 BRAT1Q6PJG6 821 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PAOXQ6QHF9 649 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 USP45Q70EL2 814 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 BZW1Q7L1Q6 419 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PARS2Q7L3T8 475 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 POLNQ7Z5Q5 900 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SRLQ86TD4 932 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 TMTC1Q8IUR5 882 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 RHOT1Q8IXI2 618 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CCDC170Q8IYT3 715 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 NIPA2Q8N8Q9 360 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 MFSD2AQ8NA29 543 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ATL2Q8NHH9 583 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ARRDC3Q96B67 414 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 LRRC45Q96CN5 670 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 WDR89Q96FK6 387 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 MRFAP1L1Q96HT8 127 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF641Q96N77 438 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CSPG4P5Q96PW8 444 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 TUBGCP5Q96RT8 1024 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CHP1Q99653 195 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF670Q9BS34 389 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PACSIN1Q9BY11 444 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SLC17A9Q9BYT1 436 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 POLR1EQ9GZS1 481 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SEMA6CQ9H3T2 930 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 SYNDIG1Q9H7V2 258 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 PCDH18Q9HCL0 1135 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 NT5MQ9NPB1 228 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 DDX56Q9NY93 547 aaKnown RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 RCOR3Q9P2K3 495 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-219ENST00000569882 INTUQ9ULD6 942 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 ITM2BQ9Y287 266 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 CFAP54Q96N23 3096 aa4.86□□□□□ -1.63
CNOT1-219ENST00000569882 TMEM238LA0A1B0GVL6 79 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 IGLON5A6NGN9 336 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 SOWAHDA6NJG2 315 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 A8MX80 341 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 H0Y8X5 98 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 CACNB4O00305 520 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-219ENST00000569882 GIPC1O14908 333 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 INSIG1O15503 277 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 LATO43561 262 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 AP1G1O43747 822 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 MFSD11O43934 449 aa4.85□□□□□ -1.63
CNOT1-219ENST00000569882 STK10O94804 968 aaKnown RBP4.85□□□□□ -1.63
CNOT1-219ENST00000569882 TRIM16O95361 564 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms