RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 LYSMD3Q7Z3D4 306 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 IPMKQ8NFU5 416 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 NUS1Q96E22 293 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 EDEM2Q9BV94 578 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 FICDQ9BVA6 458 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 FSD1LQ9BXM9 530 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 AP1M1Q9BXS5 423 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 TEX101Q9BY14 249 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 ZFYVE1Q9HBF4 777 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 ETNK1Q9HBU6 452 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 PCDHGB2Q9Y5G2 931 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 SNX11Q9Y5W9 270 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 ARID1BQ8NFD5 2236 aaPredicted RBP13.4□□□□□ -0.26
CDH1-204ENST00000562118 GOLGA6L10A0A0M3HER8 536 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 C1orf232A0A0U1RR37 186 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 SPTY2D1-AS1A0A0U1RR47 76 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 GOLGA6CA6NDK9 693 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 AURKAO14965 403 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 LZTS3O60299 673 aaPredicted RBP13.4□□□□□ -0.26
CDH1-204ENST00000562118 CER1O95813 267 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 CFIP05156 583 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 ZSCAN5DPP0CG00 497 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 GOLGA6DP0CG33 693 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 THEGLP0DJG4 465 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 TSHRP16473 764 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 SLC14A1Q13336 389 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 OLIG2Q13516 323 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 FZD2Q14332 565 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 PNCKQ6P2M8 343 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.26
CDH1-204ENST00000562118 ADAMTSL4Q6UY14 1074 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 SYT10Q6XYQ8 523 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 RFLNAQ6ZTI6 216 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 Q6ZVL8 140 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 PRUNE1Q86TP1 453 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 OXR1Q8N573 874 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 PLA2G15Q8NCC3 412 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 NETO1Q8TDF5 533 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 MAGOHBQ96A72 148 aaKnown RBP13.4□□□□□ -0.26
CDH1-204ENST00000562118 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 RMDN1Q96DB5 314 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 KLHDC7BQ96G42 594 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 COX14Q96I36 57 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 TBATAQ96M53 351 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 PLEKHG4BQ96PX9 1271 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 TBL1YQ9BQ87 522 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 ABCG8Q9H221 673 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 FSCN3Q9NQT6 498 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 AASDHPPTQ9NRN7 309 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 IL17CQ9P0M4 197 aa13.4□□□□□ -0.26
CDH1-204ENST00000562118 A0A1B0GTQ1 180 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 A8MX80 341 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 F5H423 210 aaPredicted RBP13.39□□□□□ -0.27
CDH1-204ENST00000562118 CCDC188H7C350 402 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 K7ESM1 405 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 GAPDHSO14556 408 aaPredicted RBP13.39□□□□□ -0.27
CDH1-204ENST00000562118 YKT6O15498 198 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PCDHGA12O60330 932 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 GDF9O60383 454 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 IFNB1P01574 187 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PYGLP06737 847 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 TPSB2P20231 275 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PTGIRP43119 386 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 CDK16Q00536 496 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 INPP5AQ14642 412 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 ACOX1Q15067 660 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 TPSAB1Q15661 275 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 HLA-BQ31612 363 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 FAXCQ5TGI0 409 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 ARMC3Q5W041 872 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PDPK2PQ6A1A2 396 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 KDM7AQ6ZMT4 941 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 Q6ZSR6 202 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 ZNF534Q76KX8 674 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 KDELC2Q7Z4H8 507 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 MINDY1Q8N5J2 469 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
CDH1-204ENST00000562118 BRSK1Q8TDC3 778 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 SCARF2Q96GP6 870 aaPredicted RBP13.39□□□□□ -0.27
CDH1-204ENST00000562118 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
CDH1-204ENST00000562118 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 TMEM9BQ9NQ34 198 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 CASS4Q9NQ75 786 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 GDF3Q9NR23 364 aa13.39□□□□□ -0.27
CDH1-204ENST00000562118 PNMA8BQ9ULN7 279 aaPredicted RBP13.39□□□□□ -0.27
CDH1-204ENST00000562118 CACNA1AO00555 2505 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 SLC30A4O14863 429 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 LDB2O43679 373 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 PIRTP0C851 137 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 IVDP26440 423 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 CASQ1P31415 396 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 ACTN2P35609 894 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 ZNF140P52738 457 aaPredicted RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 C21orf59P57076 290 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms