RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RTTNQ86VV8 2226 aa5.35□□□□□ -1.55
HERC1-213ENST00000561359 TNRC6AQ8NDV7 1962 aaKnown RBP5.35□□□□□ -1.55
HERC1-213ENST00000561359 ATRQ13535 2644 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ABCA4P78363 2273 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 MN1Q10571 1320 aaPredicted RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 TMEM200CA6NKL6 621 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TMEM110-MUSTN1A8MSY1 372 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 A8MU76 341 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 F5H5T6 163 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 K7ERQ8 282 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TULP2O00295 520 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TOR1BO14657 336 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 EPB41L2O43491 1005 aaKnown RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 EXOC3O60645 756 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 PAGE1O75459 146 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 CREG1O75629 220 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TNFP01375 233 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 APOEP02649 317 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 THRAP10827 490 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 SRCP12931 536 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 LCP1P13796 627 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TACR2P21452 398 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 GJB2P29033 226 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 SSTR2P30874 369 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 L1CAMP32004 1257 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 STAT1P42224 750 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 PIK3CAP42336 1068 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 PEX5P50542 639 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 DNA2P51530 1060 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 MAZP56270 477 aaKnown RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 MC2RQ01718 297 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ART3Q13508 389 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 CHRNA6Q15825 494 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ZC3H12AQ5D1E8 599 aaKnown RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 VWA2Q5GFL6 755 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 CPZQ66K79 652 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 DPY19L3Q6ZPD9 716 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 SLC47A2Q86VL8 602 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 RHOT1Q8IXI2 618 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 NXPE1Q8N323 547 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 BMPERQ8N8U9 685 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ANKRD52Q8NB46 1076 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 RNF214Q8ND24 703 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ATL2Q8NHH9 583 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 KIAA1524Q8TCG1 905 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ASB12Q8WXK4 309 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TAF4BQ92750 862 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ISL2Q96A47 359 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 FCRL2Q96LA5 508 aaPredicted RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 RBM15Q96T37 977 aaKnown RBP eCLIP5.34□□□□□ -1.55
HERC1-213ENST00000561359 ULBP3Q9BZM4 244 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TRIM8Q9BZR9 551 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ING2Q9H160 280 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TNKS2Q9H2K2 1166 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 CYP3A43Q9HB55 503 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 APMAPQ9HDC9 416 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 MLXIPLQ9NP71 852 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 CHST11Q9NPF2 352 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 MBNL1Q9NR56 388 aaKnown RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 AGPAT3Q9NRZ7 376 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 TMEM9Q9P0T7 183 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 G3BP2Q9UN86 482 aaKnown RBP5.34□□□□□ -1.55
HERC1-213ENST00000561359 OSGIN2Q9Y236 505 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ITM2BQ9Y287 266 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 PCDHGB7Q9Y5F8 929 aa5.34□□□□□ -1.55
HERC1-213ENST00000561359 ZNF106Q9H2Y7 1883 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 FRMD3A2A2Y4 597 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 TCAF2A6NFQ2 919 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 ARGFXA6NJG6 315 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 LRRIQ3A6PVS8 624 aaPredicted RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 XPO1O14980 1071 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 POLR1CO15160 346 aaPredicted RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 TGFB1I1O43294 461 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 SMAD6O43541 496 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 SNAP91O60641 907 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 TM7SF2O76062 418 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 ASS1P00966 412 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 HLA-DRAP01903 254 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 LTFP02788 710 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 BMP6P22004 513 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 HTR1EP28566 365 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 CSF2RBP32927 897 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 HOXD13P35453 343 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 LONP1P36776 959 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 GPR3P46089 330 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 ART1P52961 327 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 DAOAP59103 153 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 KRTAP10-9P60411 292 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 KRT83P78385 493 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 HMGN5P82970 282 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 NFATC4Q14934 902 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 IRF4Q15306 451 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 GOLGA7BQ2TAP0 167 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 PLEKHN1Q494U1 663 aaPredicted RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 RABGAP1LQ5R372 815 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 RRAGBQ5VZM2 374 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 PAPD7Q5XG87 772 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 CXorf57Q6NSI4 855 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 C6orf15Q6UXA7 325 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms