RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 OR2AK2Q8NG84 335 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 SGCZQ96LD1 299 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 ZNF570Q96NI8 536 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 NEURL2Q9BR09 285 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 MXRA8Q9BRK3 442 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 TUBB2BQ9BVA1 445 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 DDX4Q9NQI0 724 aaKnown RBP2.49□□□□□ -2.01
SPG11-222ENST00000560435 MRPS28Q9Y2Q9 187 aaKnown RBP2.49□□□□□ -2.01
SPG11-222ENST00000560435 SMCHD1A6NHR9 2005 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 ZNHIT1O43257 154 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 G6PDP11413 515 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 TLX1P31314 330 aaPredicted RBP2.48□□□□□ -2.01
SPG11-222ENST00000560435 PPM1AP35813 382 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 SERPINF1P36955 418 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 SPOCK1Q08629 439 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 CCDC96Q2M329 555 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 ZNF613Q6PF04 617 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 LINS1Q8NG48 757 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 THAP4Q8WY91 577 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 ARHGEF26Q96DR7 871 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 ZNF300Q96RE9 604 aaPredicted RBP2.48□□□□□ -2.01
SPG11-222ENST00000560435 TWNKQ96RR1 684 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 IWS1Q96ST2 819 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 MTERF1Q99551 399 aaKnown RBP2.48□□□□□ -2.01
SPG11-222ENST00000560435 MKKSQ9NPJ1 570 aaPredicted RBP2.48□□□□□ -2.01
SPG11-222ENST00000560435 CHPF2Q9P2E5 772 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 POLG2Q9UHN1 485 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 CSAG2Q9Y5P2 127 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 STON1Q9Y6Q2 735 aa2.48□□□□□ -2.01
SPG11-222ENST00000560435 CROCCQ5TZA2 2017 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 C17orf113A0A1B0GUU1 675 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 DDX5P17844 614 aaKnown RBP2.47□□□□□ -2.01
SPG11-222ENST00000560435 MAOAP21397 527 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 DDIT3P35638 169 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 CLDN2P57739 230 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 BTKQ06187 659 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 TBX2Q13207 712 aaPredicted RBP2.47□□□□□ -2.01
SPG11-222ENST00000560435 EIF2S3LQ2VIR3 472 aaKnown RBP2.47□□□□□ -2.01
SPG11-222ENST00000560435 SNAI3Q3KNW1 292 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 CCDC181Q5TID7 509 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 SULT6B1Q6IMI4 303 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 CCAR1Q8IX12 1150 aaKnown RBP2.47□□□□□ -2.01
SPG11-222ENST00000560435 CPXM2Q8N436 756 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 ZNF527Q8NB42 609 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 OR6Y1Q8NGX8 325 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 OR52I2Q8NH67 350 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 PIGTQ969N2 578 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 FBXL8Q96CD0 374 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 LINGO1Q96FE5 620 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 FOXN4Q96NZ1 517 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 CMKLR1Q99788 373 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 SYT11Q9BT88 431 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 KCNN2Q9H2S1 579 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 PLEKHA4Q9H4M7 779 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 INTS10Q9NVR2 710 aaKnown RBP2.47□□□□□ -2.01
SPG11-222ENST00000560435 ADPRHL2Q9NX46 363 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 CDC23Q9UJX2 597 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 LOXL2Q9Y4K0 774 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 KIAA1210Q9ULL0 1709 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 PCNX3Q9H6A9 2034 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 DISP3Q9P2K9 1392 aa2.47□□□□□ -2.01
SPG11-222ENST00000560435 CEP104O60308 925 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 CTSVO60911 334 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 SKAP2O75563 359 aaPredicted RBP2.46□□□□□ -2.02
SPG11-222ENST00000560435 KRT38O76015 456 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 KRTAP1-4P0C5Y4 121 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 ETFAP13804 333 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 SLC2A4P14672 509 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 TYMPP19971 482 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 SHC1P29353 583 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 MAP2K2P36507 400 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 GALNT1Q10472 559 aaPredicted RBP2.46□□□□□ -2.02
SPG11-222ENST00000560435 CBWD5Q5RIA9 395 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 OR7E24Q6IFN5 339 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 DENND1BQ6P3S1 775 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 GGT6Q6P531 493 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 MOB3CQ70IA8 216 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 LINC00612Q8N6U2 182 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 PPHLN1Q8NEY8 458 aaKnown RBP2.46□□□□□ -2.02
SPG11-222ENST00000560435 RAB40AQ8WXH6 277 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 GOLGA1Q92805 767 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 RBM17Q96I25 401 aaKnown RBP2.46□□□□□ -2.02
SPG11-222ENST00000560435 C18orf12Q96KH6 178 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 MPHOSPH8Q99549 860 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 SH3GL2Q99962 352 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 TMEM181Q9P2C4 612 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 CARD8Q9Y2G2 431 aa2.46□□□□□ -2.02
SPG11-222ENST00000560435 ACKR2O00590 384 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 CYC1P08574 325 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 FAM106CPP0CH98 169 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 CEACAM1P13688 526 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 ACADSP16219 412 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 PDIA3P30101 505 aaKnown RBP2.45□□□□□ -2.02
SPG11-222ENST00000560435 BDKRB2P30411 391 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 TANGO2Q6ICL3 276 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 TTI2Q6NXR4 508 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 PGBD2Q6P3X8 592 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 C17orf99Q6UX52 265 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 NOXA1Q86UR1 476 aa2.45□□□□□ -2.02
SPG11-222ENST00000560435 KIAA2013Q8IYS2 634 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms