RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ZNF529Q6P280 563 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PAQR9Q6ZVX9 377 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 STXBP4Q6ZWJ1 553 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 MED25Q71SY5 747 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 LPCAT2Q7L5N7 544 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PIP4P1Q86T03 277 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 MYO1HQ8N1T3 1032 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PDILTQ8N807 584 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 TERB1Q8NA31 727 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 B3GALNT2Q8NCR0 500 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 OR6B3Q8NGW1 331 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 HMGB4Q8WW32 186 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 FBXO32Q969P5 355 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 WBP2Q969T9 261 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 KCNK16Q96T55 309 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 NEU1Q99519 415 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 NUSAP1Q9BXS6 441 aaKnown RBP6.32□□□□□ -1.4
CLPX-202ENST00000558103 B3GNT5Q9BYG0 378 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 SPHK2Q9NRA0 654 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 GOLGA6AQ9NYA3 693 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 CALCOCO1Q9P1Z2 691 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 BCCIPQ9P287 314 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLPX-202ENST00000558103 NEUROG3Q9Y4Z2 214 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 PLXNA2O75051 1894 aa6.32□□□□□ -1.4
CLPX-202ENST00000558103 ANKRD11Q6UB99 2663 aaPredicted RBP6.31□□□□□ -1.4
CLPX-202ENST00000558103 IGHV1OR15-9A0A0B4J2B8 117 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 CCDC154A6NI56 674 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 TMEM200CA6NKL6 621 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SRRM3A6NNA2 597 aaPredicted RBP6.31□□□□□ -1.4
CLPX-202ENST00000558103 A8MXQ7 604 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 CLIC2O15247 247 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 AP5Z1O43299 807 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 NCR1O76036 304 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 HOXB2P14652 356 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 YWHAQP27348 245 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 ATICP31939 592 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 PGFP49763 221 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 ADKP55263 362 aaKnown RBP6.31□□□□□ -1.4
CLPX-202ENST00000558103 CTXN1P60606 82 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 MYL6P60660 151 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SNRPFP62306 86 aaKnown RBP6.31□□□□□ -1.4
CLPX-202ENST00000558103 TNNC1P63316 161 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 TIGD2Q4W5G0 525 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 C10orf76Q5T2E6 689 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 TRMT11Q7Z4G4 463 aaKnown RBP6.31□□□□□ -1.4
CLPX-202ENST00000558103 TTC30AQ86WT1 665 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 BBS7Q8IWZ6 715 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 RHOT2Q8IXI1 618 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 C12orf56Q8IXR9 622 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 XXYLT1Q8NBI6 393 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 LINC00301Q8NCQ3 95 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 ZMIZ2Q8NF64 920 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SCAMP5Q8TAC9 235 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SCFD1Q8WVM8 642 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SMARCD1Q96GM5 515 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SDCBP2Q9H190 292 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SNX25Q9H3E2 840 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 CUEDC2Q9H467 287 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SLC32A1Q9H598 525 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SMYD3Q9H7B4 428 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 CSNK1G1Q9HCP0 422 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 DMAP1Q9NPF5 467 aaPredicted RBP6.31□□□□□ -1.4
CLPX-202ENST00000558103 CD93Q9NPY3 652 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 FSCN3Q9NQT6 498 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 DEC1Q9P2X7 70 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 DKK2Q9UBU2 259 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 KLK13Q9UKR3 277 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 MTMR6Q9Y217 621 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 NUMA1Q14980 2115 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 ATRXP46100 2492 aa6.31□□□□□ -1.4
CLPX-202ENST00000558103 SPAARA0A1B0GVQ0 90 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 TBC1D3BA6NDS4 549 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 LRRIQ3A6PVS8 624 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 PRRT4C9JH25 899 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 SGTAO43765 313 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 CACNG3O60359 315 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 PPP6R2O75170 966 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 ZNF217O75362 1048 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 GJB3O75712 270 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 BEST1O76090 585 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 NDUFA10O95299 355 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 ABHD16AO95870 558 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 SERPINF2P08697 491 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 NTSR1P30989 418 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 RECQLP46063 649 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 CASP4P49662 377 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 HMGA2P52926 109 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 CDH8P55286 799 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 FAM193AP78312 1265 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 ASIC1P78348 528 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 SIM1P81133 766 aaPredicted RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 ZNF33AQ06730 810 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 DPTQ07507 201 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 TARDBPQ13148 414 aaKnown RBP eCLIP6.3□□□□□ -1.4
CLPX-202ENST00000558103 IL10RAQ13651 578 aa6.3□□□□□ -1.4
CLPX-202ENST00000558103 BYSLQ13895 437 aaKnown RBP6.3□□□□□ -1.4
CLPX-202ENST00000558103 DUOXA1Q1HG43 343 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms