RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 METTL27Q8N6F8 245 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 TNIP2Q8NFZ5 429 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 DUSP19Q8WTR2 217 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 TAF15Q92804 592 aaKnown RBP eCLIP4.1□□□□□ -1.75
VRK1-207ENST00000557352 ZNF501Q96CX3 271 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 BBS4Q96RK4 519 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 PYM1Q9BRP8 204 aaKnown RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 C1QTNF5Q9BXJ0 243 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 MAGEE1Q9HCI5 957 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 LSM4Q9Y4Z0 139 aaKnown RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 SYNJ2O15056 1496 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 MAP3K1Q13233 1512 aa4.1□□□□□ -1.75
VRK1-207ENST00000557352 ZNF608Q9ULD9 1512 aaPredicted RBP4.1□□□□□ -1.75
VRK1-207ENST00000557352 GOLGA6L10A0A0M3HER8 536 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 MT-CYBP00156 380 aaPredicted RBP4.09□□□□□ -1.75
VRK1-207ENST00000557352 URODP06132 367 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 GALTP07902 379 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 POU1F1P28069 291 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 DDIT3P35638 169 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 USP8P40818 1118 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 GPD2P43304 727 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 EFNA5P52803 228 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 RAD23BP54727 409 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 EFNB1P98172 346 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 TCTN1Q2MV58 587 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 MAP3K21Q5TCX8 1036 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 PLEKHA7Q6IQ23 1121 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 FBXO46Q6PJ61 603 aaPredicted RBP4.09□□□□□ -1.75
VRK1-207ENST00000557352 BBS12Q6ZW61 710 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 DHX40Q8IX18 779 aaKnown RBP4.09□□□□□ -1.75
VRK1-207ENST00000557352 C1orf87Q8N0U7 546 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 C11orf65Q8NCR3 313 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 CTCFLQ8NI51 663 aaPredicted RBP4.09□□□□□ -1.75
VRK1-207ENST00000557352 ALG14Q96F25 216 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 FBXO9Q9UK97 447 aaPredicted RBP4.09□□□□□ -1.75
VRK1-207ENST00000557352 PADI1Q9ULC6 663 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 CLIP1P30622 1438 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 GRIN2AQ12879 1464 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 UGGT2Q9NYU1 1516 aa4.09□□□□□ -1.75
VRK1-207ENST00000557352 SHROOM2Q13796 1616 aa4.09□□□□□ -1.76
VRK1-207ENST00000557352 GOLGA6L9A6NEM1 432 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 TMEM202A6NGA9 273 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 AQRO60306 1485 aaKnown RBP eCLIP4.08□□□□□ -1.76
VRK1-207ENST00000557352 MAOAP21397 527 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 SHMT1P34896 483 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 HNRNPH2P55795 449 aaKnown RBP4.08□□□□□ -1.76
VRK1-207ENST00000557352 RHBDL3P58872 404 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 NUP160Q12769 1436 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 KRT24Q2M2I5 525 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 C2orf68Q2NKX9 166 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 SNAPC4Q5SXM2 1469 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 ATG16L1Q676U5 607 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 TRNP1Q6NT89 227 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 CPLX2Q6PUV4 134 aaKnown RBP4.08□□□□□ -1.76
VRK1-207ENST00000557352 RNF113BQ8IZP6 322 aaKnown RBP4.08□□□□□ -1.76
VRK1-207ENST00000557352 VPS8Q8N3P4 1428 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 ZBTB2Q8N680 514 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 SLC24A4Q8NFF2 622 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 TTYH1Q9H313 450 aaPredicted RBP4.08□□□□□ -1.76
VRK1-207ENST00000557352 DDX43Q9NXZ2 648 aaKnown RBP4.08□□□□□ -1.76
VRK1-207ENST00000557352 AMDHD2Q9Y303 409 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 FAM96BQ9Y3D0 163 aa4.08□□□□□ -1.76
VRK1-207ENST00000557352 LRRIQ1Q96JM4 1722 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 CEP170Q5SW79 1584 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 KIAA0586Q9BVV6 1533 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 ARAP1Q96P48 1450 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 ARHGAP35Q9NRY4 1499 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 TDRD9Q8NDG6 1382 aaKnown RBP4.07□□□□□ -1.76
VRK1-207ENST00000557352 NBNO60934 754 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 TACC1O75410 805 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 MYOD1P15172 320 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 DDX5P17844 614 aaKnown RBP4.07□□□□□ -1.76
VRK1-207ENST00000557352 METAP2P50579 478 aaKnown RBP eCLIP4.07□□□□□ -1.76
VRK1-207ENST00000557352 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 TDGQ13569 410 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 FCN2Q15485 313 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 HIST2H2ACQ16777 129 aaPredicted RBP4.07□□□□□ -1.76
VRK1-207ENST00000557352 SLC45A4Q5BKX6 768 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 ZNF766Q5HY98 468 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 TMEM81Q6P7N7 255 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 NKAPQ8N5F7 415 aaKnown RBP4.07□□□□□ -1.76
VRK1-207ENST00000557352 SPATA5Q8NB90 893 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 OR2AK2Q8NG84 335 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 GRAPLQ8TC17 118 aaPredicted RBP4.07□□□□□ -1.76
VRK1-207ENST00000557352 LRRC1Q9BTT6 524 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 HEMGNQ9BXL5 484 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 GFRA4Q9GZZ7 299 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 BPIFA1Q9NP55 256 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 MMP25Q9NPA2 562 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 C20orf141Q9NUB4 165 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 HSPB7Q9UBY9 170 aa4.07□□□□□ -1.76
VRK1-207ENST00000557352 KIAA0556O60303 1618 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 TFP02787 698 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 PRSS1P07477 247 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 RRM1P23921 792 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 CORO1AP31146 461 aaKnown RBP4.06□□□□□ -1.76
VRK1-207ENST00000557352 GNL1P36915 607 aaPredicted RBP4.06□□□□□ -1.76
VRK1-207ENST00000557352 SREBF2Q12772 1141 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 NFIL3Q16649 462 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms