RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 TYK2P29597 1187 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 PNPLA4P41247 253 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 CCL23P55773 120 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 BEX3Q00994 111 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 TFAP4Q01664 338 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 RHAGQ02094 409 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 CNTN2Q02246 1040 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 BIRC3Q13489 604 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 GALNT3Q14435 633 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 CCDC96Q2M329 555 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 SMTNL2Q2TAL5 461 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 CRELD2Q6UXH1 353 aaPredicted RBP5.42□□□□□ -1.54
HIF1A-209ENST00000556827 LRIG3Q6UXM1 1119 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 CYB5R4Q7L1T6 521 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 KLBQ86Z14 1044 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 KBTBD3Q8NAB2 608 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 FTOQ9C0B1 505 aaKnown RBP eCLIP5.42□□□□□ -1.54
HIF1A-209ENST00000556827 NAPBQ9H115 298 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 RNF146Q9NTX7 359 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 ZBTB40Q9NUA8 1239 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 TMEM248Q9NWD8 314 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 MSRB1Q9NZV6 116 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 ADD3Q9UEY8 706 aaKnown RBP5.42□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF580Q9UK33 172 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 STX8Q9UNK0 236 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 COG5Q9UP83 839 aa5.42□□□□□ -1.54
HIF1A-209ENST00000556827 PLXNB2O15031 1838 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 ATAD5Q96QE3 1844 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 LOC102724159A0A0B4J2E5 919 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 GPAA1O43292 621 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 NEURL1O76050 574 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 CD4P01730 458 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 CPA1P15085 419 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 MCCP23508 829 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 GSTM2P28161 218 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 RFC2P35250 354 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 PAPOLAP51003 745 aaKnown RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 SLC12A1Q13621 1099 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 SEMA3AQ14563 771 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 PWP2Q15269 919 aaKnown RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 LEXMQ3ZCV2 418 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 GXYLT1Q4G148 440 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 KLHL22Q53GT1 634 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 RUNDC3AQ59EK9 446 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 HMBOX1Q6NT76 420 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF354CQ86Y25 554 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 DDIASQ8IXT1 998 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 FAM133AQ8N9E0 248 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 USP38Q8NB14 1042 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 PHOSPHO2Q8TCD6 241 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 ADAMTS15Q8TE58 950 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 MSI2Q96DH6 328 aaKnown RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 PYM1Q9BRP8 204 aaKnown RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 MTG1Q9BT17 334 aaPredicted RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 FSD1Q9BTV5 496 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 CTDSP1Q9GZU7 261 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 TRPV6Q9H1D0 765 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 ALDH8A1Q9H2A2 487 aaPredicted RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 Q9N2J8 555 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 THSD1Q9NS62 852 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 AGO2Q9UKV8 859 aaKnown RBP5.41□□□□□ -1.54
HIF1A-209ENST00000556827 CCPG1Q9ULG6 757 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF236Q9UL36 1845 aa5.41□□□□□ -1.54
HIF1A-209ENST00000556827 RANBP2P49792 3224 aaKnown RBP5.4□□□□□ -1.54
HIF1A-209ENST00000556827 IGKV6D-41A0A0C4DH26 115 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 A0A0G2JK05 382 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 KIR2DS5A0A0G2JLQ3 304 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.4□□□□□ -1.54
HIF1A-209ENST00000556827 A6NNC1 897 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 B4DGG1 531 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF814B7Z6K7 855 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 KIR2DS3K7RE56 304 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 RANBP6O60518 1105 aaKnown RBP5.4□□□□□ -1.54
HIF1A-209ENST00000556827 ICAM1P05362 532 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CHRNB1P11230 501 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CYP4B1P13584 511 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CNTFP26441 200 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 KLRC2P26717 231 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CCKARP32238 428 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 MCM2P49736 904 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 MVDP53602 400 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 THOC5Q13769 683 aaKnown RBP5.4□□□□□ -1.54
HIF1A-209ENST00000556827 PPP2R5BQ15173 497 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 DUSP28Q4G0W2 176 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CTXN3Q4LDR2 81 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 DEFB128Q7Z7B8 93 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CCDC25Q86WR0 208 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CPOQ8IVL8 374 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 BRSK2Q8IWQ3 736 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 FBXO16Q8IX29 292 aaPredicted RBP5.4□□□□□ -1.54
HIF1A-209ENST00000556827 STAMQ92783 540 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 ZNF419Q96HQ0 510 aaPredicted RBP5.4□□□□□ -1.54
HIF1A-209ENST00000556827 FAM234AQ9H0X4 552 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 SPAG4Q9NPE6 437 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 CYP39A1Q9NYL5 469 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 RRN3Q9NYV6 651 aa5.4□□□□□ -1.54
HIF1A-209ENST00000556827 SIPA1L1O43166 1804 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms