RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 DZIP1Q86YF9 867 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SLC25A41Q8N5S1 370 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 PDILTQ8N807 584 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 RASSF8Q8NHQ8 419 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 DPF1Q92782 380 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ATOH1Q92858 354 aaPredicted RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SMARCE1Q969G3 411 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 NR1H4Q96RI1 486 aaPredicted RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SIGLEC11Q96RL6 698 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 LSG1Q9H089 658 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 IL25Q9H293 177 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 PIH1D3Q9NQM4 214 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 C20orf141Q9NUB4 165 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 HMG20BQ9P0W2 317 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 KIAA1456Q9P272 454 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 PIAS3Q9Y6X2 628 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF532Q9HCE3 1301 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 COL1A1P02452 1464 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 A0A096LPK6 155 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 TYW5A2RUC4 315 aaKnown RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 C17orf102A2RUQ5 167 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 DDTLA6NHG4 134 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 NPIPB15A6NHN6 443 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 LRRC53A6NM62 1247 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 PRSS47A8MTI9 375 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 AP3D1O14617 1153 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 HNRNPCL1O60812 293 aaKnown RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 SEC14L2O76054 403 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 GFPT2O94808 682 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 LATS1O95835 1130 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 WNT1P04628 370 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 CTSAP10619 480 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 ACADMP11310 421 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 EPHB2P29323 1055 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 HSPA4P34932 840 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 RGS2P41220 211 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 GNAQP50148 359 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 CFHR1Q03591 330 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 GAD2Q05329 585 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 RUNX2Q13950 521 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 PPP2R5BQ15173 497 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 CCNG2Q16589 344 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 KIAA1614Q5VZ46 1190 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 ATG9BQ674R7 924 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 NAA16Q6N069 864 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 YTHDF3Q7Z739 585 aaKnown RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 PXKQ7Z7A4 578 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 TMC8Q8IU68 726 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 ADSSL1Q8N142 457 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 SLC44A5Q8NCS7 719 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 DDB2Q92466 427 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 CRAMP1Q96RY5 1269 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 PIP5K1AQ99755 562 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 TREX2Q9BQ50 279 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 H2AFJQ9BTM1 129 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 UPF3BQ9BZI7 483 aaKnown RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 TMPRSS5Q9H3S3 457 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 ADARB2Q9NS39 739 aaKnown RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 TMEM184CQ9NVA4 438 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 FLRT1Q9NZU1 646 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 CTNNAL1Q9UBT7 734 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 HSPB7Q9UBY9 170 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 PLEKHB1Q9UF11 243 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 AGO2Q9UKV8 859 aaKnown RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 NAP1L2Q9ULW6 460 aaPredicted RBP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAV15-201ENST00000556680 SLC4A4Q9Y6R1 1079 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 C10orf71Q711Q0 1435 aa4.38□□□□□ -1.71
TRAV15-201ENST00000556680 SIPA1L1O43166 1804 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 TRBV5-3A0A0A0MS03 114 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 TRBV5-7A0A0A0MS05 114 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 KCNU1A8MYU2 1149 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 GPAA1O43292 621 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 DOK2O60496 412 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 BBOX1O75936 387 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF8P17098 575 aaPredicted RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 PSMA5P28066 241 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 BSGP35613 385 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 TDO2P48775 406 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 DRG2P55039 364 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 HAND2P61296 217 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 GOLGA8DPQ0D2H9 430 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 TMEM115Q12893 351 aaPredicted RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 PRKG2Q13237 762 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 DAZAP2Q15038 168 aaPredicted RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 HIST2H2ACQ16777 129 aaPredicted RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 IMMTQ16891 758 aaKnown RBP4.37□□□□□ -1.71
TRAV15-201ENST00000556680 CRY2Q49AN0 593 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 C6orf10Q5SRN2 563 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 SNX30Q5VWJ9 437 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 SPATA1Q5VX52 437 aa4.37□□□□□ -1.71
TRAV15-201ENST00000556680 CDC73Q6P1J9 531 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms