RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HK3P52790 923 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 KRT83P78385 493 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CDC20Q12834 499 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 STK4Q13043 487 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 EIF4EBP2Q13542 120 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 FBLN7Q53RD9 439 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CERCAMQ5T4B2 595 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 PRAMEF13Q5VWM6 474 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 SYPL2Q5VXT5 272 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 MACC1Q6ZN28 852 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 INTS8Q75QN2 995 aaKnown RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 BEND5Q7L4P6 421 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 SPRED1Q7Z699 444 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 TSACCQ96A04 125 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 EEF2KMTQ96G04 330 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 EFHD1Q9BUP0 239 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 MMRN2Q9H8L6 949 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 RAB20Q9NX57 234 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 GGT7Q9UJ14 662 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 TBC1D30Q9Y2I9 924 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 B3GALT1Q9Y5Z6 326 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC168Q8NDH2 2452 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 ADGRG4Q8IZF6 3080 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 SCN8AQ9UQD0 1980 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 TMEM110-MUSTN1A8MSY1 372 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 NEMP1O14524 444 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 B4GAT1O43505 415 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 CALUO43852 315 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 RAD1O60671 282 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 CLDN11O75508 207 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 ZNF821O75541 412 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 RASGRP1O95267 797 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 CPNE6O95741 557 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 IGLV3-25P01717 112 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 KRT13P13646 458 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 OAS2P29728 719 aaKnown RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 IGFALSP35858 605 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 PEX5P50542 639 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 B4GALNT1Q00973 533 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 MC1RQ01726 317 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 AUHQ13825 339 aaKnown RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 ARHGEF7Q14155 803 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 CNGA2Q16280 664 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 ARHGAP44Q17R89 818 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 FAM173BQ6P4H8 233 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 ASB18Q6ZVZ8 466 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 PARS2Q7L3T8 475 aaKnown RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 PIM3Q86V86 326 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 KIAA0895Q8NCT3 520 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 RCBTB1Q8NDN9 531 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 FBXL13Q8NEE6 735 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 RAB7BQ96AH8 199 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 MOCOSQ96EN8 888 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 RPRD1AQ96P16 312 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 PSMB7Q99436 277 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 HEPHQ9BQS7 1158 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 DDA1Q9BW61 102 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 MIS12Q9H081 205 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 GPN2Q9H9Y4 310 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 MAGEF1Q9HAY2 307 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 CASS4Q9NQ75 786 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 MBNL1Q9NR56 388 aaKnown RBP6.92□□□□□ -1.3
ATXN3-236ENST00000556220 C19orf73Q9NVV2 129 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 DONSONQ9NYP3 566 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 LRIT1Q9P2V4 623 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 VPS51Q9UID3 782 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 PILRAQ9UKJ1 303 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 SPG11Q96JI7 2443 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 HIVEP1P15822 2718 aa6.92□□□□□ -1.3
ATXN3-236ENST00000556220 POLEQ07864 2286 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 IGHV5-10-1A0A0J9YXX1 117 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 LOC101059948A0A1B0GTJ6 334 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 C16orf96A6NNT2 1141 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 MKRN2OSH3BPM6 223 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 NUDT21O43809 227 aaKnown RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 KLRC4O43908 158 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 ENDOD1O94919 500 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 TSPAN15O95858 294 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 TRUB2O95900 331 aaKnown RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CBX7O95931 251 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 SLC2A3P11169 496 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 PDCP20941 246 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 RPL34P49207 117 aaKnown RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CDH4P55283 916 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 TRA2AQ13595 282 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CUL2Q13617 745 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CUL4BQ13620 913 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 HLTFQ14527 1009 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 TCEA2Q15560 299 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 NFIL3Q16649 462 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CLPPQ16740 277 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 ALG11Q2TAA5 492 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 EIF2S3LQ2VIR3 472 aaKnown RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 EDRF1Q3B7T1 1238 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 AMZ1Q400G9 498 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 C5orf22Q49AR2 442 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms