RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
PPP4R3A-202ENST00000554390 TBC1D13Q9NVG8 400 aa16.95■□□□□ 0.3
PPP4R3A-202ENST00000554390 ANKRD6Q9Y2G4 727 aa16.95■□□□□ 0.3
PPP4R3A-202ENST00000554390 ACOT9Q9Y305 439 aa16.95■□□□□ 0.3
PPP4R3A-202ENST00000554390 NOX1Q9Y5S8 564 aa16.95■□□□□ 0.3
PPP4R3A-202ENST00000554390 NR4A1P22736 598 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 ELK4P28324 431 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 NOS2P35228 1153 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 RAD23AP54725 363 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 CACNB2Q08289 660 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 INPP5AQ14642 412 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 ZNF846Q147U1 533 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 SF3B4Q15427 424 aaKnown RBP eCLIP16.94■□□□□ 0.32e-11■■■□□ 18.6
PPP4R3A-202ENST00000554390 ZNF484Q5JVG2 852 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 TAPT1Q6NXT6 567 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 SLC27A1Q6PCB7 646 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 DDIASQ8IXT1 998 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 LINC01465Q8N7H1 131 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 HDAC10Q969S8 669 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 ZUFSPQ96AP4 578 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 PAAF1Q9BRP4 392 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 LHPPQ9H008 270 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 DSEQ9UL01 958 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 A8MU76 341 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 SNAP29O95721 258 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 SLC4A1P02730 911 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 NPR3P17342 541 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 PSMA4P25789 261 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 CSE1LP55060 971 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 LILRA4P59901 499 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 CAPRIN1Q14444 709 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 CLPPQ16740 277 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 TMTC4Q5T4D3 741 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 ZNF773Q6PK81 442 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 PIWIL3Q7Z3Z3 882 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 BEGAINQ9BUH8 593 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 RAD54BQ9Y620 910 aa16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 MKI67P46013 3256 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-202ENST00000554390 HTTP42858 3142 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 FZD9O00144 591 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 MSI1O43347 362 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 MYO1DO94832 1006 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 ARNTP27540 789 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 PGFP49763 221 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 PTPRCAPQ14761 206 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 ZBTB6Q15916 424 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 PGS1Q32NB8 556 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 PLA2G4EQ3MJ16 856 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 KCTD11Q693B1 232 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 PIM3Q86V86 326 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 ZDHHC17Q8IUH5 632 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 GPR22Q99680 433 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 CTRCQ99895 268 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 MCMBPQ9BTE3 642 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 HACD3Q9P035 362 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 AQP12BA6NM10 295 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 FAM47E-STBD1D6RA91 191 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 NME4O00746 187 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 SYNCRIPO60506 623 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 DNASE1L3Q13609 305 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 SPCS2Q15005 226 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 AQP12AQ8IXF9 295 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 PNPT1Q8TCS8 783 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 LPPQ93052 612 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 DUSP16Q9BY84 665 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 YTHDF1Q9BYJ9 559 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 DNMT3BQ9UBC3 853 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 STAP1Q9ULZ2 295 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 ERVK-11Q9UQG0 969 aa16.93■□□□□ 0.3
PPP4R3A-202ENST00000554390 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 TCEA1P23193 301 aaKnown RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 RPS9P46781 194 aaKnown RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 KCNC1P48547 511 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 SLC26A2P50443 739 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 CSRP3P50461 194 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 IFITM3Q01628 133 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 PAFAH1B3Q15102 231 aaKnown RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 INAQ16352 499 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 AGAP7PQ5VUJ5 663 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 XAF1Q6GPH4 301 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 PTCD2Q8WV60 388 aaKnown RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 NDEL1Q9GZM8 345 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 MPP6Q9NZW5 540 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 WDR90Q96KV7 1748 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 TNS1Q9HBL0 1735 aaKnown RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 NPHS1O60500 1241 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 GJB3O75712 270 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 C7P10643 843 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 STMN1P16949 149 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 JUNBP17275 347 aaPredicted RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 OCA2Q04671 838 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 GTF2IRD2BQ6EKJ0 949 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 GTF2IRD2Q86UP8 949 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 FAM35AQ86V20 835 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 RETREG3Q86VR2 466 aa16.92■□□□□ 0.3
PPP4R3A-202ENST00000554390 CRYBG2Q8N1P7 616 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms