RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CYP2A6P11509 494 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 PNLIPP16233 465 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 CD82P27701 267 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 COPB1P53618 953 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 AP1S1P61966 158 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 RPL7AP62424 266 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 CERCAMQ5T4B2 595 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 ERMARDQ5T6L9 678 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 E4F1Q66K89 784 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 SPECC1LQ69YQ0 1117 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 ACAD10Q6JQN1 1059 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 DPY19L2P1Q6NXN4 242 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 PCSK4Q6UW60 755 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 MON1BQ7L1V2 547 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 IL22RA1Q8N6P7 574 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 TSEN2Q8NCE0 465 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 OR1E3Q8WZA6 343 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 USP7Q93009 1102 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 NUS1Q96E22 293 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 AHCYL2Q96HN2 611 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 PCDHB18PQ96TA0 734 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 XPO4Q9C0E2 1151 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 KLC2Q9H0B6 622 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 NOL6Q9H6R4 1146 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 MRPL40Q9NQ50 206 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 PCSK1NQ9UHG2 260 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 APPL1Q9UKG1 709 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 PRAMEF33A0A0G2JMD5 474 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 A0A1W2PNU3 283 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 A0A1W2PQM1 296 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 PRSS38A1L453 326 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 STMND1H3BQB6 276 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 H3BRJ5 948 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 EFSO43281 561 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 PRAMEF10O60809 474 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 WISP1O95388 367 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 CPNE6O95741 557 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 CPP00450 1065 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 MYCLP1P12525 358 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 ITIH1P19827 911 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 CSTF2P33240 577 aaKnown RBP eCLIP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 MAN1A1P33908 653 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 HSPA9P38646 679 aaKnown RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 ARL4AP40617 200 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 GNPDA1P46926 289 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 CSNK1DP48730 415 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 ZNF135P52742 658 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 PDX1P52945 283 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 IL10RBQ08334 325 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 NSUN2Q08J23 767 aaKnown RBP eCLIP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 PTP4A2Q12974 167 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 TGIF1Q15583 401 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 TMCO4Q5TGY1 634 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 RAET1GQ6H3X3 334 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 PNCKQ6P2M8 343 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 LIPIQ6XZB0 460 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 ATG14Q6ZNE5 492 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 RFX8Q6ZV50 586 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 DPPA4Q7L190 304 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 SPRED1Q7Z699 444 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 LZTR1Q8N653 840 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 GPR156Q8NFN8 814 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 ZDHHC1Q8WTX9 485 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 EXTL1Q92935 676 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 FUBP1Q96AE4 644 aaKnown RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 SEMA4CQ9C0C4 833 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 SLC39A8Q9C0K1 460 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 TMEM168Q9H0V1 697 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 STN1Q9H668 368 aaKnown RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 LRRC19Q9H756 370 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 FGF22Q9HCT0 170 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 FANCLQ9NW38 375 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 IFNKQ9P0W0 207 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 PNMA8BQ9ULN7 279 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-217ENST00000552801 NEU3Q9UQ49 428 aa8.71□□□□□ -1.02
TMEM116-217ENST00000552801 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 LRP4O75096 1905 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 A0A1W2PQC6 194 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 TMEM202A6NGA9 273 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 LGALS16A8MUM7 142 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 PYCARD-AS1I3L0S3 204 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 NRDCO43847 1150 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 BUB1BO60566 1050 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 PPFIA2O75334 1257 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 HOXC4P09017 264 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 ERCC2P18074 760 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 VARSP26640 1264 aaKnown RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 VIPR1P32241 457 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 EPHB1P54762 984 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 FANCCQ00597 558 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 ITKQ08881 620 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 LBRQ14739 615 aaKnown RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 ASIC2Q16515 512 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 CLPPQ16740 277 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 FILIP1LQ4L180 1135 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 CDKAL1Q5VV42 579 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 DOK6Q6PKX4 331 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms