RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 GON4LQ3T8J9 2241 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 TEX15Q9BXT5 2789 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EVPLQ92817 2033 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ACACAQ13085 2346 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KLF18A0A0U1RQI7 1052 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TTC26A0AVF1 554 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 A1L4Q6 167 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ZAR1LA6NP61 321 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 AGPSO00116 658 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EIF3FO00303 357 aaPredicted RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TRDMT1O14717 391 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PPEF2O14830 753 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PCDH17O14917 1159 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 NCAM2O15394 837 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CCL16O15467 120 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ASAP2O43150 1006 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EPB41L2O43491 1005 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PEX1O43933 1283 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KINO60870 393 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CBFA2T3O75081 653 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 FAM155BO75949 473 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 C1QL1O75973 258 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 WDR47O94967 919 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 NXPH3O95157 252 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EPN2O95208 641 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SPDEFO95238 335 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KCNK5O95279 499 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LARGE1O95461 756 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PYGLP06737 847 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM225BP0DP42 221 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ITGAMP11215 1152 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 XBP1P17861 261 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CYP11B2P19099 503 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 NR4A1P22736 598 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SFPQP23246 707 aaKnown RBP eCLIP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 RPS6KB1P23443 525 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TMOD1P28289 359 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TKTP29401 623 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CDC25AP30304 524 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 YWHABP31946 246 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 OR1D2P34982 312 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 BRCC3P46736 316 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CLCNKBP51801 687 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 DGKQP52824 942 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SUMO2P61956 95 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ROR1Q01973 937 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CSTF1Q05048 431 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 GRIK3Q13003 919 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TRDNQ13061 729 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TBX2Q13207 712 aaPredicted RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TP53BP2Q13625 1128 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EFR3AQ14156 821 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CTTNQ14247 550 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EMC2Q15006 297 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SF3A2Q15428 464 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TBCCQ15814 346 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ST3GAL2Q16842 350 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 BTBD16Q32M84 506 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PLK5Q496M5 336 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM196Q5HYL7 178 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SPECC1Q5M775 1068 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF569Q5MCW4 686 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LY6G5CQ5SRR4 150 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 HYIQ5T013 277 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ABHD17BQ5VST6 288 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LAIR1Q6GTX8 287 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TWF2Q6IBS0 349 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CENPPQ6IPU0 288 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LIN54Q6MZP7 749 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SLC39A4Q6P5W5 647 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SLC27A1Q6PCB7 646 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 C1orf186Q6ZWK4 172 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KBTBD6Q86V97 674 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CATSPER3Q86XQ3 398 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 P3H2Q8IVL5 708 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ARHGEF19Q8IW93 802 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 MFSD6LQ8IWD5 586 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SFTPA1Q8IWL2 248 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 BLIDQ8IZY5 108 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LNX2Q8N448 690 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CNNM3Q8NE01 707 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SCAMP5Q8TAC9 235 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 HMGB4Q8WW32 186 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 XAGE5Q8WWM1 108 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PSPC1Q8WXF1 523 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 THAP4Q8WY91 577 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CPT1BQ92523 772 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 GOLGA1Q92805 767 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 FUBP1Q96AE4 644 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 FKBP10Q96AY3 582 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF274Q96GC6 653 aaPredicted RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TRAPPC9Q96Q05 1148 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 HAPLN3Q96S86 360 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 MAP7D2Q96T17 732 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KXD1Q9BQD3 176 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 EIF2AK1Q9BQI3 630 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LXNQ9BS40 222 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TTPALQ9BTX7 342 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms