RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SLC46A1Q96NT5 459 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 HAPLN3Q96S86 360 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 TSPAN18Q96SJ8 248 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 TCHPQ9BT92 498 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 TTYH3Q9C0H2 523 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 MAGEF1Q9HAY2 307 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 SERHLQ9NQF3 203 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 HPS4Q9NQG7 708 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 EHD3Q9NZN3 535 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 HESX1Q9UBX0 185 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 ZNF180Q9UJW8 692 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 ADAM21Q9UKJ8 722 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 PNMA8BQ9ULN7 279 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-214ENST00000550893 SSX2IPQ9Y2D8 614 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 CEP295Q9C0D2 2601 aa5.15□□□□□ -1.59
SCAF11-214ENST00000550893 PVALEFA0A1B0GWK0 134 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 E2F8A0AVK6 867 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TRIM49BA6NDI0 452 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 OR6C75A6NL08 312 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 KPNA7A9QM74 516 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 HHLA1C9JL84 531 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PROB1E7EW31 1015 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CYB561D2O14569 222 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 DCLK1O15075 740 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ECI2O75521 394 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 AKAP3O75969 853 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 NOL4O94818 638 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 UNC5CO95185 931 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 IL18RAPO95256 599 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 OLFM2O95897 454 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 KRT18P05783 430 aaKnown RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PDHA1P08559 390 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TRIM49P0CI25 452 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TRIM49CP0CI26 452 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ODC1P11926 461 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CD72P21854 359 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 WARSP23381 471 aaKnown RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CYP2F1P24903 491 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ME1P48163 572 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 KCNJ5P48544 419 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TAF6P49848 677 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CYP2J2P51589 502 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ARPP19P56211 112 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 MYL6P60660 151 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TFAMQ00059 246 aaKnown RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PNOCQ13519 176 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ALCAMQ13740 583 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TBCCQ15814 346 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 NFIL3Q16649 462 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 KNOP1Q1ED39 458 aaKnown RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ZACNQ401N2 412 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 SLC39A12Q504Y0 691 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 LIN9Q5TKA1 542 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ATL3Q6DD88 541 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 SPOPLQ6IQ16 392 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ARMCX5Q6P1M9 558 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PDXDC1Q6P996 788 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 RTL10Q7L3V2 364 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 BHLHA9Q7RTU4 235 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ASCL5Q7RTU5 278 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TRAPPC11Q7Z392 1133 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 AMIGO2Q86SJ2 522 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 WDR49Q8IV35 697 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 SFTPA1Q8IWL2 248 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CD302Q8IX05 232 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CCDC65Q8IXS2 484 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 FSIP1Q8NA03 581 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 IQUBQ8NA54 791 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PJA1Q8NG27 643 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 SEMA4DQ92854 862 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 MYLPFQ96A32 169 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 MCRS1Q96EZ8 462 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PYM1Q9BRP8 204 aaKnown RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TTLL2Q9BWV7 592 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TBC1D17Q9HA65 648 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 SARS2Q9NP81 518 aaKnown RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ARHGEF3Q9NR81 526 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 GCNT4Q9P109 453 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 IGSF9Q9P2J2 1179 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ITGA11Q9UKX5 1188 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CA14Q9ULX7 337 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TRAF3IP3Q9Y228 551 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 FRMD4BQ9Y2L6 1034 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 TNFRSF18Q9Y5U5 241 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 PTPRZ1P23471 2315 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-214ENST00000550893 CELSR3Q9NYQ7 3312 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 ABCA7Q8IZY2 2146 aa5.14□□□□□ -1.59
SCAF11-214ENST00000550893 SDK1Q7Z5N4 2213 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 DOCK4Q8N1I0 1966 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 FAM92AA1XBS5 289 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 H7C4K7 107 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 PPM1DO15297 605 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 BEST1O76090 585 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 ASS1P00966 412 aaKnown RBP5.13□□□□□ -1.59
SCAF11-214ENST00000550893 RPN1P04843 607 aaKnown RBP5.13□□□□□ -1.59
SCAF11-214ENST00000550893 DCNP07585 359 aaKnown RBP5.13□□□□□ -1.59
SCAF11-214ENST00000550893 ZFXP17010 805 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-214ENST00000550893 NBL1P41271 181 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 CLCN5P51795 746 aa5.13□□□□□ -1.59
SCAF11-214ENST00000550893 CDH8P55286 799 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms