RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 GPIP06744 558 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 RHOCP08134 193 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 THRBP10828 461 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TKTP29401 623 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 KRT6CP48668 564 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 IDH2P48735 452 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PIK3CGP48736 1102 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ACAP2Q15057 778 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PPP1R3AQ16821 1122 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNF280DQ6N043 979 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CTU1Q7Z7A3 348 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 OR2T12Q8NG77 320 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 DQX1Q8TE96 717 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 OTULINQ96BN8 352 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PCYT2Q99447 389 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 HNRNPABQ99729 332 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ADGRE3Q9BY15 652 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ABCG8Q9H221 673 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 EPB41L1Q9H4G0 881 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SUCOQ9UBS9 1254 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNHIT2Q9UHR6 403 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 GMPPBQ9Y5P6 360 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 OR51F1A6NGY5 319 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 A8MT66 165 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 HTRA2O43464 458 aaPredicted RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 RECQL5O94762 991 aaPredicted RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 CES1P23141 567 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 SOAT1P35610 550 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 SOX6P35712 828 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 HALP42357 657 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 STT3AP46977 705 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 POLR2JP52435 117 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 MS4A2Q01362 244 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 DSC2Q02487 901 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 PRKCQQ04759 706 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 PWP1Q13610 501 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 SIM2Q14190 667 aaPredicted RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNF846Q147U1 533 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 GPR162Q16538 588 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 NOMO2Q5JPE7 1267 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 RBM20Q5T481 1227 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNF621Q6ZSS3 439 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 TAC4Q86UU9 113 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 LGI2Q8N0V4 545 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 TOP6BLQ8N6T0 577 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 OR4L1Q8NH43 312 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 ROPN1LQ96C74 230 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 ZHX1-C8orf76Q96EF9 292 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 CDCA5Q96FF9 252 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 AGO3Q9H9G7 860 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 ATP13A1Q9HD20 1204 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 CACNA2D2Q9NY47 1150 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 CACNG4Q9UBN1 327 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 ADGRE2Q9UHX3 823 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 TBC1D30Q9Y2I9 924 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 DERAQ9Y315 318 aa10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 MARF1Q9Y4F3 1742 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 MYH14Q7Z406 1995 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-209ENST00000550164 CITO14578 2027 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 C5orf58C9J3I9 102 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 AGRPO00253 132 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 SMIM10L2AP0DMW4 78 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 SMIM10L2BP0DMW5 78 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 BRCC3P46736 316 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 DAOAP59103 153 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 TRAP1Q12931 704 aaKnown RBP10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 PPP1R8Q12972 351 aaKnown RBP10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 CTXN3Q4LDR2 81 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 CCNYL2Q5T2Q4 361 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 NECAB2Q7Z6G3 386 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 PLEKHH3Q7Z736 793 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 GALNT5Q7Z7M9 940 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 C11orf74Q86VG3 221 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 TP53INP2Q8IXH6 220 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 PHC3Q8NDX5 983 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 ITFG2Q969R8 447 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 FBXL20Q96IG2 436 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 PDLIM7Q9NR12 457 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 FBXW11Q9UKB1 542 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 TRIM17Q9Y577 477 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 A8MX80 341 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 GPR182O15218 404 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 CXCR3P49682 368 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 INCA1Q0VD86 236 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 SH3D19Q5HYK7 790 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 SPANXN2Q5MJ10 180 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 ARMC4Q5T2S8 1044 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 KIAA0408Q6ZU52 694 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 CHSY3Q70JA7 882 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 TLK2Q86UE8 772 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 HTRA1Q92743 480 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 PCED1BQ96HM7 432 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 ZNF778Q96MU6 729 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms