RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CD8B2A6NJW9 211 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 H3BNX3 289 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 PRPF4O43172 522 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 FMO6PO60774 539 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CNOT3O75175 753 aaKnown RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 AVILO75366 819 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 B3GALNT1O75752 331 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 KAT7O95251 611 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ADAP00813 363 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ALPLP05186 524 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 FGF2P09038 288 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 NDUFS1P28331 727 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 HOXA13P31271 388 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 KIF5BP33176 963 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TCF7P36402 384 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 PIP4K2AP48426 406 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 THBS3P49746 956 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 AGTR2P50052 363 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 NPY4RP50391 375 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 EFNA5P52803 228 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 GALCP54803 685 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CSE1LP55060 971 aaKnown RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CFHR3Q02985 330 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 YWHAHQ04917 246 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 DDR1Q08345 913 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ACSM2AQ08AH3 577 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 PTK6Q13882 451 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 RUNX2Q13950 521 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 NFE2L1Q14494 772 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CNGA3Q16281 694 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 HIST2H2ACQ16777 129 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CRY2Q49AN0 593 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CCDC158Q5M9N0 1113 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ACSM2BQ68CK6 577 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 AADACL2Q6P093 401 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 KYAT3Q6YP21 454 aaKnown RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 LCA5Q86VQ0 697 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TMEM200AQ86VY9 491 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ADGRF3Q8IZF5 1079 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ARL6IP6Q8N6S5 226 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TEX9Q8N6V9 391 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 SCAIQ8N9R8 606 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 SETD9Q8NE22 299 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 SGCDQ92629 289 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF622Q969S3 477 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TMCO6Q96DC7 493 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ARHGEF26Q96DR7 871 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ELMOD3Q96FG2 381 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 LYZL4Q96KX0 146 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CFAP57Q96MR6 1250 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 FYTTD1Q96QD9 318 aaKnown RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 MYCBPQ99417 103 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 FSD1Q9BTV5 496 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 IFT27Q9BW83 186 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TRIM2Q9C040 744 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 KIF9Q9HAQ2 790 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ASAH2Q9NR71 780 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TUBE1Q9UJT0 475 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 PADI1Q9ULC6 663 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 FZD4Q9ULV1 537 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 PKP3Q9Y446 797 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 SQORQ9Y6N5 450 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF644Q9H582 1327 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CFTRP13569 1480 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 TOPBP1Q92547 1522 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 CEP170Q5SW79 1584 aa4.36□□□□□ -1.71
SCAF11-210ENST00000547654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-210ENST00000547654 TCRBV21S2A2A0A5A6 115 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 TMEM247A6NEH6 219 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 MCIDASD6RGH6 385 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 CPLX1O14810 134 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 PRAMEF2O60811 474 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 GCATO75600 419 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 RECQL5O94762 991 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-210ENST00000547654 TPOP07202 933 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 FAM200BP0CF97 657 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 SLC2A4P14672 509 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 DESP17661 470 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 PON1P27169 355 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 HOXD9P28356 352 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-210ENST00000547654 TYK2P29597 1187 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 CDAP32320 146 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 PTPN9P43378 593 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 CCR10P46092 362 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 HTR6P50406 440 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 PNLIPRP2P54317 469 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 SHC2P98077 582 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 TFAP4Q01664 338 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 CYP4A11Q02928 519 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 OLIG2Q13516 323 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 SEMA3AQ14563 771 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 SMU1Q2TAY7 513 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 GLE1Q53GS7 698 aaKnown RBP4.35□□□□□ -1.71
SCAF11-210ENST00000547654 IGSF11Q5DX21 431 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
SCAF11-210ENST00000547654 RAB12Q6IQ22 244 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms