RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ARNT2Q9HBZ2 717 aa10.92□□□□□ -0.66
GCN1-202ENST00000547263 UCKL1Q9NWZ5 548 aa10.92□□□□□ -0.66
GCN1-202ENST00000547263 KLHL8Q9P2G9 620 aaPredicted RBP10.92□□□□□ -0.66
GCN1-202ENST00000547263 TTLL3Q9Y4R7 772 aa10.92□□□□□ -0.66
GCN1-202ENST00000547263 PCDHGA1Q9Y5H4 931 aa10.92□□□□□ -0.66
GCN1-202ENST00000547263 U3KQA8 63 aa10.92□□□□□ -0.66
GCN1-202ENST00000547263 PLXNB3Q9ULL4 1909 aa10.92□□□□□ -0.66
GCN1-202ENST00000547263 A0A0U1RQS6 177 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SPAARA0A1B0GVQ0 90 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 GOLGA6L9A6NEM1 432 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 TMEM202A6NGA9 273 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 A8MX80 341 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 H7C0C1 242 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 TRIM38O00635 465 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 GCATO75600 419 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 NEBLO76041 1014 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 CLDN7O95471 211 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 FUCA1P04066 466 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 PYGLP06737 847 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ITGAVP06756 1048 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 MYCLP1P12525 358 aaPredicted RBP10.91□□□□□ -0.66
GCN1-202ENST00000547263 HLA-DPA1P20036 260 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ATP5OP48047 213 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SPINT3P49223 89 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 HK3P52790 923 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 THOP1P52888 689 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 CDK3Q00526 305 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ARHGEF7Q14155 803 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ACOX1Q15067 660 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 RPS6KA1Q15418 735 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SLC1A5Q15758 541 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ADAMTSL4Q6UY14 1074 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 NYAP1Q6ZVC0 841 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 LYSMD3Q7Z3D4 306 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SLCO6A1Q86UG4 719 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 PHACTR4Q8IZ21 702 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 TTC30BQ8N4P2 665 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ZNF548Q8NEK5 533 aaPredicted RBP10.91□□□□□ -0.66
GCN1-202ENST00000547263 RHBDD1Q8TEB9 315 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 WDR92Q96MX6 357 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 ALS2CR12Q96Q35 445 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 LRRC61Q9BV99 259 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 LGR4Q9BXB1 951 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 CLPBQ9H078 707 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 CDH19Q9H159 772 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 TCEAL2Q9H3H9 227 aaPredicted RBP10.91□□□□□ -0.66
GCN1-202ENST00000547263 TRABDQ9H4I3 376 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 C10orf88Q9H8K7 445 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 FGF22Q9HCT0 170 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 LZTFL1Q9NQ48 299 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 NLGN3Q9NZ94 848 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SEPT10Q9P0V9 454 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 CNOT6Q9ULM6 557 aaKnown RBP10.91□□□□□ -0.66
GCN1-202ENST00000547263 SLC17A4Q9Y2C5 497 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 OR1A2Q9Y585 309 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SPO11Q9Y5K1 396 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 SPTBN2O15020 2390 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 NCOR2Q9Y618 2525 aa10.91□□□□□ -0.66
GCN1-202ENST00000547263 MYLKQ15746 1914 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 LMO7DNF2Z398 122 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 H3BM21 787 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 KCNN4O15554 427 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 AQP9O43315 295 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 LIASO43766 372 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 SDC3O75056 442 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 PMPCBO75439 489 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ANXA9O76027 345 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 TRIM16O95361 564 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 PCCBP05166 539 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 FGF1P05230 155 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 FTH1P19P0C7X4 201 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 JUNDP17535 347 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ACP1P24666 158 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 HMGCLP35914 325 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ACADVLP49748 655 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 BLKP51451 505 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 EPHB1P54762 984 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 GDF10P55107 478 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 SIM1P81133 766 aaPredicted RBP10.9□□□□□ -0.66
GCN1-202ENST00000547263 GALNT3Q14435 633 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 SIRPB2Q5JXA9 342 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 SEL1L2Q5TEA6 688 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 DENND5AQ6IQ26 1287 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 LVRNQ6Q4G3 990 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 HEATR4Q86WZ0 1026 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 RBFAQ8N0V3 343 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 RASGEF1CQ8N431 466 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.9□□□□□ -0.66
GCN1-202ENST00000547263 OR56A4Q8NGH8 313 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ATL2Q8NHH9 583 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 SETD7Q8WTS6 366 aaKnown RBP10.9□□□□□ -0.66
GCN1-202ENST00000547263 OR1E3Q8WZA6 343 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 SCAMP4Q969E2 229 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 PPP1R2P1Q96PQ5 205 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 DUSP23Q9BVJ7 150 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 BOCQ9BWV1 1114 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
GCN1-202ENST00000547263 WDR26Q9H7D7 661 aa10.9□□□□□ -0.66
GCN1-202ENST00000547263 ZFYVE1Q9HBF4 777 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms