RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 A0A1W2PP55 124 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 KPNA3O00505 521 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 MID1O15344 667 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 PSMD3O43242 534 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 SLC7A4O43246 635 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 SOCS5O75159 536 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 LEFTY1O75610 366 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 RFPL3O75679 317 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 CTSLP07711 333 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 ABCG1P45844 678 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 RXRGP48443 463 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 SLC7A5Q01650 507 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 TRAF2Q12933 501 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 SEMA5AQ13591 1074 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 FAM46CQ5VWP2 391 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 IZUMO3Q5VZ72 239 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 CAMK1DQ8IU85 385 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 MFSD2AQ8NA29 543 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 LSM14AQ8ND56 463 aaKnown RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 PIP4K2CQ8TBX8 421 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 SNF8Q96H20 258 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 PPP1R16AQ96I34 528 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 CNDP2Q96KP4 475 aaKnown RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 KLHL32Q96NJ5 620 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 MLPHQ9BV36 600 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-226ENST00000547259 NRSN2Q9GZP1 204 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 DYRK4Q9NR20 520 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 PCDHGC4Q9Y5F7 938 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 RAI2Q9Y5P3 530 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 BPTFQ12830 3046 aa12.12□□□□□ -0.47
HDAC7-226ENST00000547259 KALRNO60229 2985 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3DA0A087WVF3 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3IA0A087WXS9 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3EA0A087X179 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3KA0A087X1G2 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3FA6NER0 549 aaPredicted RBP12.11□□□□□ -0.47
HDAC7-226ENST00000547259 ERI2A8K979 691 aaKnown RBP12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3LB9A6J9 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TLR4O00206 839 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 NDC80O14777 642 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 AP2A1O95782 977 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 CPP00450 1065 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 APRTP07741 180 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 RHOXF2BP0C7M4 288 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3HP0C7X1 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 WNT3AP56704 352 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 POM121L1PQ3SYA9 428 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 ARMC12Q5T9G4 340 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3GQ6DHY5 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3CQ6IPX1 549 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 KDELC1Q6UW63 502 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 PCGF5Q86SE9 256 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBC1D3Q8IZP1 549 aaPredicted RBP12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TMIEQ8NEW7 156 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 SAP25Q8TEE9 199 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TADA1Q96BN2 335 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 FEM1CQ96JP0 617 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 SERAC1Q96JX3 654 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 NSMCE3Q96MG7 304 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 ZNF641Q96N77 438 aaPredicted RBP12.11□□□□□ -0.47
HDAC7-226ENST00000547259 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 TBL1YQ9BQ87 522 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 RHOXF2Q9BQY4 288 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 FICDQ9BVA6 458 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 SUV39H2Q9H5I1 410 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 EIF2B3Q9NR50 452 aaKnown RBP12.11□□□□□ -0.47
HDAC7-226ENST00000547259 PPM1HQ9ULR3 514 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 SNX24Q9Y343 169 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 AK5Q9Y6K8 562 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 SLCO1B1Q9Y6L6 691 aa12.11□□□□□ -0.47
HDAC7-226ENST00000547259 A0A1W2PQ67 120 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 LATO43561 262 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 RNGTTO60942 597 aaKnown RBP12.1□□□□□ -0.47
HDAC7-226ENST00000547259 TPSB2P20231 275 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-226ENST00000547259 ITGB7P26010 798 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 RPL21P46778 160 aaKnown RBP12.1□□□□□ -0.47
HDAC7-226ENST00000547259 EPHB1P54762 984 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 E2F1Q01094 437 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 IL9RQ01113 521 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 GUCY2DQ02846 1103 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 CDK18Q07002 472 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 C19orf57Q0VDD7 668 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 GALNT3Q14435 633 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 SPARCL1Q14515 664 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 IHHQ14623 411 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 KCNJ11Q14654 390 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms