RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LMO3Q8TAP4 145 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 POF1BQ8WVV4 589 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 KCNK16Q96T55 309 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 RHOBTB2Q9BYZ6 727 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 GRIP2Q9C0E4 1043 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SDCBP2Q9H190 292 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 NMRAL1Q9HBL8 299 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 EFR3BQ9Y2G0 817 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ATAD5Q96QE3 1844 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 GTPBP1O00178 669 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ERAL1O75616 437 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 CES1P23141 567 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 PMF1Q6P1K2 205 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 SATL1Q86VE3 508 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ADGRG2Q8IZP9 1017 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 CMTM5Q96DZ9 223 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 FAM120BQ96EK7 910 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 PTPRHQ9HD43 1115 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 MPP6Q9NZW5 540 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 DNAJB4Q9UDY4 337 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 NOCTQ9UK39 431 aaKnown RBP8.61□□□□□ -1.03
CLIP1-218ENST00000545889 STXBP5LQ9Y2K9 1186 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 HCN4Q9Y3Q4 1203 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 GMEB1Q9Y692 573 aa8.61□□□□□ -1.03
CLIP1-218ENST00000545889 PIPSLA2A3N6 862 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HTR3EA5X5Y0 456 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HACD1B0YJ81 288 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 H3BNH8 94 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 XPO1O14980 1071 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SCN2BO60939 215 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PENKP01210 267 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HIST1H2ABP04908 130 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 LPOP22079 712 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 NME5P56597 212 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CSTF3Q12996 717 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TAF5Q15542 800 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HIST3H2AQ7L7L0 130 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ZBTB46Q86UZ6 589 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 GPSM1Q86YR5 675 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HIST1H2ACQ93077 130 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 KIAA1143Q96AT1 154 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 AP2M1Q96CW1 435 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SAMD11Q96NU1 681 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TBCDQ9BTW9 1192 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PRRG3Q9BZD7 231 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CXCL16Q9H2A7 254 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ZC4H2Q9NQZ6 224 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 NFKBIL1Q9UBC1 381 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SUCOQ9UBS9 1254 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CIDEBQ9UHD4 219 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 GNPTGQ9UJJ9 305 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ANAPC2Q9UJX6 822 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 KIF13BQ9NQT8 1826 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 A0A1W2PQ67 120 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 E9PBE3 544 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ENPP3O14638 875 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 NRP1O14786 923 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SGTAO43765 313 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SEC24DO94855 1032 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ERBB2P04626 1255 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CCNB1P14635 433 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 FLT3P36888 993 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 MAXP61244 160 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 MRPS5P82675 430 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 OC90Q02509 493 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CBX2Q14781 532 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TAF13Q15543 124 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TRIP10Q15642 601 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 WDR45BQ5MNZ6 344 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 WASHC2DQ5SRD0 308 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TPGS2Q68CL5 300 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PDPK2PQ6A1A2 396 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PAGE2Q7Z2X7 111 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ANKS1BQ7Z6G8 1248 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CPNE8Q86YQ8 564 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PRSS58Q8IYP2 241 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 OR56A4Q8NGH8 313 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SH3RF2Q8TEC5 729 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 BADQ92934 168 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 DCUN1D5Q9BTE7 237 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 DENND2DQ9H6A0 471 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CROTQ9UKG9 612 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TMEM98Q9Y2Y6 226 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 A0A0J9YVX5 310 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 C5orf60A6NFR6 353 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PCP4L1A6NKN8 68 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TPST1O60507 370 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PABPC1P11940 636 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ITPKBP27987 946 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 GP5P40197 560 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PTPN9P43378 593 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TTPAP49638 278 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PTPRNQ16849 979 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 KHDC1Q4VXA5 237 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SCARA3Q6AZY7 606 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 C11orf63Q6NUN7 778 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 LVRNQ6Q4G3 990 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms