RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MFSD4AQ8N468 514 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 C1orf127Q8N9H9 656 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 RDM1Q8NG50 284 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 SMURF2Q9HAU4 748 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 HPS4Q9NQG7 708 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 ENPP5Q9UJA9 477 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 PDE10AQ9Y233 779 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 VWA7Q9Y334 891 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 NDUFAF1Q9Y375 327 aa12.68□□□□□ -0.38
SMG8-202ENST00000543872 TRIP11Q15643 1979 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SYCE1LA8MT33 242 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 INO80B-WBP1J3KQ70 363 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 CCRL2O00421 344 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SNX2O60749 519 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SUPT7LO94864 414 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 PRKCBP05771 671 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 GSTM2P28161 218 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ARL2P36404 184 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 VAC14Q08AM6 782 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ILF2Q12905 390 aaKnown RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 SKIV2LQ15477 1246 aaKnown RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 USP51Q70EK9 711 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 RALGPS2Q86X27 583 aaPredicted RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 LRRC49Q8IUZ0 686 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 LRRC71Q8N4P6 559 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 OSCP1Q8WVF1 389 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 MED30Q96HR3 178 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 TMEM74Q96NL1 305 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 CDK5RAP1Q96SZ6 601 aaKnown RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 GPR22Q99680 433 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SLC30A3Q99726 388 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 KCTD14Q9BQ13 255 aaPredicted RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 STRCP1A6NGW2 1772 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 CAPN3P20807 821 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 CXCR2P25025 360 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 GSK3BP49841 420 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 NCS1P62166 190 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 CTF1Q16619 201 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ADPRMQ3LIE5 342 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ANKRD34AQ69YU3 496 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ACOT1Q86TX2 421 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 VSIG10LQ86VR7 867 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 PSTKQ8IV42 348 aaKnown RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 HCAR2Q8TDS4 363 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 FIG4Q92562 907 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 RHOJQ9H4E5 214 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 FAM95CA0A1B0GW59 222 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 H3BMM5 538 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 B4GALT5O43286 388 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 KPNA6O60684 536 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ALDOCP09972 364 aaKnown RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 THRBP10828 461 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SPNP16150 400 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SLC6A2P23975 617 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 ATP5F1P24539 256 aaPredicted RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 SERPINB10P48595 397 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 TAS2R39P59534 338 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 ACAP2Q15057 778 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 PPP1R26Q5T8A7 1209 aaPredicted RBP12.67□□□□□ -0.38
SMG8-202ENST00000543872 ABHD15Q6UXT9 468 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMG8-202ENST00000543872 BDH2Q9BUT1 245 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 TRIM39Q9HCM9 518 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 SATB2Q9UPW6 733 aa12.67□□□□□ -0.38
SMG8-202ENST00000543872 TARM1B6A8C7 271 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 NPHS1O60500 1241 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 GPIP06744 558 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 TCF3P15923 654 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 ENPP1P22413 925 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 TGFBR1P36897 503 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 ARCN1P48444 511 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 RAB10P61026 200 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 LIPEQ05469 1076 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 NFYCQ13952 458 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 DPY19L1Q2PZI1 675 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 LCN8Q6JVE9 175 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 PRR23CQ6ZRP0 262 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 SPATC1Q76KD6 591 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 GALNT13Q8IUC8 556 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 TBC1D21Q8IYX1 336 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 NDRG1Q92597 394 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 FAM149B1Q96BN6 582 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 TOR3AQ9H497 397 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 RPF1Q9H9Y2 349 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 A8MV72 311 aaPredicted RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 XPNPEP2O43895 674 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 GJB1P08034 283 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 HTR1AP08908 422 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 GTF2E2P29084 291 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms