RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 LATS2Q9NRM7 1088 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 TDP1Q9NUW8 608 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 TBC1D23Q9NUY8 699 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 ARL8BQ9NVJ2 186 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 SEPT3Q9UH03 358 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 ZNF232Q9UNY5 417 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 PLA2G4CQ9UP65 541 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 LRRC37A2A6NM11 1700 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 INPP4BO15327 924 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 CRCPO75575 148 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 ASMTLO95671 621 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 HSPA4LO95757 839 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 ITGA2BP08514 1039 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 PGAM1P18669 254 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 PAMP19021 973 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 MAGEA11P43364 429 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 SOX9P48436 509 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 CDKN1CP49918 316 aaPredicted RBP8.24□□□□□ -1.09
ABCA4-207ENST00000536513 NEK3P51956 506 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 NME5P56597 212 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 RAB33AQ14088 237 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 GRM3Q14832 879 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 TBC1D25Q3MII6 688 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 ACSBG2Q5FVE4 666 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 LZTR1Q8N653 840 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 SPPL3Q8TCT6 385 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 SEC14L1Q92503 715 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 HDAC11Q96DB2 347 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 TUBGCP5Q96RT8 1024 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 WRAP53Q9BUR4 548 aaKnown RBP8.24□□□□□ -1.09
ABCA4-207ENST00000536513 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 PAIP1Q9H074 479 aaKnown RBP8.24□□□□□ -1.09
ABCA4-207ENST00000536513 OSBPL2Q9H1P3 480 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 DNMT3BQ9UBC3 853 aaKnown RBP8.24□□□□□ -1.09
ABCA4-207ENST00000536513 VPS51Q9UID3 782 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 TRHDEQ9UKU6 1024 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 SLC30A1Q9Y6M5 507 aa8.24□□□□□ -1.09
ABCA4-207ENST00000536513 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 KNTC1P50748 2209 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 TK2O00142 265 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PEX1O43933 1283 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 FAM163BP0C2L3 166 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 TYRP14679 529 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 FOXN2P32314 431 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 ARSDP51689 593 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 ST8SIA6P61647 398 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CREB5Q02930 508 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 ATG16L1Q676U5 607 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 TPGS2Q68CL5 300 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 RETSATQ6NUM9 610 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PACS1Q6VY07 963 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CHRDL2Q6WN34 429 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 VPS39Q96JC1 886 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PRICKLE1Q96MT3 831 aaPredicted RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 HBEGFQ99075 208 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 WWP1Q9H0M0 922 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 ZNF212Q9UDV6 495 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 TMEM189-UBE2V1I3L0A0 370 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CLDN11O75508 207 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 WFS1O76024 890 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 RHOBTB1O94844 696 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CEBPBP17676 345 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CCNCP24863 283 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SPRP35270 261 aaPredicted RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SCNN1AP37088 669 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CDH13P55290 713 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 WDR4P57081 412 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PLIN5Q00G26 463 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 BCL2L1Q07817 233 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SEMA5AQ13591 1074 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 DNAL1Q4LDG9 190 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SIRPB2Q5JXA9 342 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 RBM20Q5T481 1227 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CMTR2Q8IYT2 770 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CHPFQ8IZ52 775 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 ATP6V1E2Q96A05 226 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 C2orf49Q9BVC5 232 aaPredicted RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 FRMD8P1Q9BZ68 369 aaPredicted RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 BRINP2Q9C0B6 783 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 NDEL1Q9GZM8 345 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 NOL6Q9H6R4 1146 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 CAPN10Q9HC96 672 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PNPLA8Q9NP80 782 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SENP1Q9P0U3 644 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 BCAP29Q9UHQ4 241 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 TRIM64CA6NLI5 447 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 LSM1O15116 133 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 GSC2O15499 205 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SRP72O76094 671 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 GFAPP14136 432 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 HADHAP40939 763 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 SKIV2L2P42285 1042 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PFKPQ01813 784 aa8.23□□□□□ -1.09
ABCA4-207ENST00000536513 MRPL58Q14197 206 aaKnown RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 PRKD1Q15139 912 aaPredicted RBP8.23□□□□□ -1.09
ABCA4-207ENST00000536513 FNDC3BQ53EP0 1204 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms