RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 NLE1Q9NVX2 485 aaPredicted RBP6.51□□□□□ -1.37
CDCA3-205ENST00000535871 SYBUQ9NX95 663 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 UBP1Q9NZI7 540 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 IL17CQ9P0M4 197 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.51□□□□□ -1.37
CDCA3-205ENST00000535871 EVLQ9UI08 416 aaPredicted RBP6.51□□□□□ -1.37
CDCA3-205ENST00000535871 CHMP2BQ9UQN3 213 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 CHKBQ9Y259 395 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 PKP3Q9Y446 797 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 PCDHGC4Q9Y5F7 938 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 COMMD10Q9Y6G5 202 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 IKBKGQ9Y6K9 419 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 STON1Q9Y6Q2 735 aa6.51□□□□□ -1.37
CDCA3-205ENST00000535871 SPTBN5Q9NRC6 3674 aaKnown RBP6.51□□□□□ -1.37
CDCA3-205ENST00000535871 TICRRQ7Z2Z1 1910 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 C5orf42Q9H799 3197 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 IQANK1A0A1B0GTG1 560 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TTC34A8MYJ7 566 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 AGPSO00116 658 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 AREL1O15033 823 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TSPAN6O43657 245 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SYNCRIPO60506 623 aaKnown RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 USP12O75317 370 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 LEFTY1O75610 366 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 RPP40O75818 363 aaKnown RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SASH3O75995 380 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 IGLV3-19P01714 112 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 INHBAP08476 426 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 PDHA1P08559 390 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SNRPAP09012 282 aaKnown RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SSTR1P30872 391 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SPRP35270 261 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 NUDT1P36639 197 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SLC26A3P40879 764 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 IL12RB1P42701 662 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 MSH2P43246 934 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 RPS9P46781 194 aaKnown RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 LEPRP48357 1165 aaKnown RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TTPAP49638 278 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 NEK3P51956 506 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 PRAMEP78395 509 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SPARCL1Q14515 664 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 POU6F1Q14863 301 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 MLF2Q15773 248 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CCDC85BQ15834 202 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CRY1Q16526 586 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 PCSK7Q16549 785 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TYSND1Q2T9J0 566 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 KBTBD12Q3ZCT8 623 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ATXN7L2Q5T6C5 722 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TEDDM1Q5T9Z0 273 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ZNF776Q68DI1 518 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 FSTL4Q6MZW2 842 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 NEPROQ6NW34 567 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 AFTPHQ6ULP2 937 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 Q7L0L9 218 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 DPPA4Q7L190 304 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SDCCAG8Q86SQ7 713 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 KCNMB4Q86W47 210 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CAMK1DQ8IU85 385 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 IGDCC3Q8IVU1 814 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CHPFQ8IZ52 775 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 GJD3Q8N144 294 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TTC30BQ8N4P2 665 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ARFGAP2Q8N6H7 521 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 OR13J1Q8NGT2 312 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 OR2T3Q8NH03 318 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 FBF1Q8TES7 1133 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 FAM3CQ92520 227 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CDKN2AIPNLQ96HQ2 116 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CABS1Q96KC9 395 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CHRDQ9H2X0 955 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ZFYVE1Q9HBF4 777 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TMBIM4Q9HC24 238 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ZDHHC4Q9NPG8 344 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 PRSS16Q9NQE7 514 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 DYRK4Q9NR20 520 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 CHRAC1Q9NRG0 131 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 SMOXQ9NWM0 555 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 MKS1Q9NXB0 559 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ZFATQ9P243 1243 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TXNDC16Q9P2K2 825 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 KLHL42Q9P2K6 505 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 FZD4Q9ULV1 537 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 MMP17Q9ULZ9 603 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 ZNF711Q9Y462 761 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 MAP4K5Q9Y4K4 846 aa6.5□□□□□ -1.37
CDCA3-205ENST00000535871 TRBV5-4A0A0C4DH59 114 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 SHISA7A6NL88 538 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 C16orf96A6NNT2 1141 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 H3BMM5 538 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 QSOX1O00391 747 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TOR1BO14657 336 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TRIM24O15164 1050 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 STX7O15400 261 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms