RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 DMWDQ09019 674 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 DLGAP5Q15398 846 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 P3H1Q32P28 736 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 CYP4A22Q5TCH4 519 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RAP1GAP2Q684P5 730 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 PPP1R21Q6ZMI0 780 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 INTS8Q75QN2 995 aaKnown RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 MCM10Q7L590 875 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 TRAPPC11Q7Z392 1133 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 PPP1R42Q7Z4L9 355 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 VPS36Q86VN1 386 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RFX6Q8HWS3 928 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RASGRP3Q8IV61 690 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 CROCCP3Q8IVE0 287 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 ADGRF4Q8IZF3 695 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 TCP11L2Q8N4U5 519 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 TMCO5AQ8N6Q1 288 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 SRFBP1Q8NEF9 429 aaKnown RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 ZNF548Q8NEK5 533 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 PJA1Q8NG27 643 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 SPATA18Q8TC71 538 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 WIPF2Q8TF74 440 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 ATL1Q8WXF7 558 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RUBCNQ92622 972 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 SGCDQ92629 289 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 KIFAP3Q92845 792 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 HAUS1Q96CS2 278 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 CDCA5Q96FF9 252 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 ANKRD36BP1Q96IX9 119 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 CLMNQ96JQ2 1002 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 MARK4Q96L34 752 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 CCDC42Q96M95 316 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 MTMR9Q96QG7 549 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RIOK1Q9BRS2 568 aaKnown RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 SCNM1Q9BWG6 230 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 GATA5Q9BWX5 397 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 AGXT2Q9BYV1 514 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 NOD2Q9HC29 1040 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 GPR108Q9NPR9 543 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 PPP1R14DQ9NXH3 145 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-219ENST00000534049 EPS15L1Q9UBC2 864 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 TBK1Q9UHD2 729 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RASAL2Q9UJF2 1139 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 NFU1Q9UMS0 254 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 FAM50BQ9Y247 325 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 MAN2B2Q9Y2E5 1009 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 RABGAP1Q9Y3P9 1069 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 TRIM17Q9Y577 477 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 TTC21BQ7Z4L5 1316 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 ANKRD26Q9UPS8 1709 aa4.37□□□□□ -1.71
ITGB1-219ENST00000534049 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 GXYLT2A0PJZ3 443 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 MACROD2A1Z1Q3 448 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 C16orf96A6NNT2 1141 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 C19orf81C9J6K1 198 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 PMM2O15305 246 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 GUCY1B2O75343 617 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 DAB1O75553 588 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 SEC31AO94979 1220 aaKnown RBP4.36□□□□□ -1.71
ITGB1-219ENST00000534049 ATP6V1G2O95670 118 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 KRT6AP02538 564 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 KRT6BP04259 564 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 RHOXF2BP0C7M4 288 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 SRGAP2BP0DMP2 458 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 ST6GAL1P15907 406 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 RXRAP19793 462 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 SERPINB6P35237 376 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 TM4SF4P48230 202 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 SOX2P48431 317 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 ALDH18A1P54886 795 aaKnown RBP4.36□□□□□ -1.71
ITGB1-219ENST00000534049 UBASH3AP57075 661 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 LINC00205P59089 165 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 KRT83P78385 493 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 NIPAL4Q0D2K0 466 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 DNAJC3Q13217 504 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 CASP8Q14790 479 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 KRT71Q3SY84 523 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 ANXA2RQ3ZCQ2 193 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 ZCWPW2Q504Y3 356 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 SPECC1Q5M775 1068 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 WDR45BQ5MNZ6 344 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 LIPMQ5VYY2 423 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 WDR93Q6P2C0 686 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 PDXDC1Q6P996 788 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 TTC23LQ6PF05 361 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 KYAT3Q6YP21 454 aaKnown RBP4.36□□□□□ -1.71
ITGB1-219ENST00000534049 PIK3AP1Q6ZUJ8 805 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 TAOK1Q7L7X3 1001 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 CACNA2D4Q7Z3S7 1137 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 EXOC3L1Q86VI1 746 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 BBOF1Q8ND07 529 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 IGFBPL1Q8WX77 278 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 GIMAP5Q96F15 307 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 C1orf74Q96LT6 269 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 TBCBQ99426 244 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 RHOXF2Q9BQY4 288 aa4.36□□□□□ -1.71
ITGB1-219ENST00000534049 PAAF1Q9BRP4 392 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms