RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 TBC1D3DA0A087WVF3 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3IA0A087WXS9 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3EA0A087X179 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3KA0A087X1G2 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 C1orf232A0A0U1RR37 186 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3FA6NER0 549 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 POM121BA6NF01 834 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 METTL12A8MUP2 240 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PATE3B3GLJ2 98 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3LB9A6J9 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 LDB2O43679 373 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 ANXA9O76027 345 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SEC31AO94979 1220 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SLU7O95391 586 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PAK4O96013 591 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 EPOP01588 193 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 FGF1P05230 155 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3HP0C7X1 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 HLA-DPA1P20036 260 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 MGAT1P26572 445 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 ECHS1P30084 290 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 ZNF140P52738 457 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 ITGA8P53708 1063 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 EPHB1P54762 984 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SESN2P58004 480 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SIM2Q14190 667 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PRPSAP1Q14558 356 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 GRM3Q14832 879 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 POU6F1Q14863 301 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 FASTKD3Q14CZ7 662 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 IRF4Q15306 451 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 FNBP1LQ5T0N5 605 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SWT1Q5T5J6 900 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3GQ6DHY5 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3CQ6IPX1 549 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TCEAL6Q6IPX3 200 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 C8orf74Q6P047 294 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 CES3Q6UWW8 571 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 GCNT7Q6ZNI0 430 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PRR23BQ6ZRT6 265 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 USP45Q70EL2 814 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TECPR1Q7Z6L1 1165 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TRIM69Q86WT6 500 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 IGDCC3Q8IVU1 814 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TBC1D3Q8IZP1 549 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 ZCCHC9Q8N567 271 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TP53I13Q8NBR0 393 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TMEM145Q8NBT3 493 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 GPR26Q8NDV2 337 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 HCAR2Q8TDS4 363 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 NAT14Q8WUY8 206 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SNX19Q92543 992 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 TCEAL3Q969E4 200 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 IFT43Q96FT9 208 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 DNAJC1Q96KC8 554 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SERPINB12Q96P63 405 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PRR14Q9BWN1 585 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 C1QTNF2Q9BXJ5 285 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 FSD1LQ9BXM9 530 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 FAM126AQ9BYI3 521 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 RAB17Q9H0T7 212 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 LRRC40Q9H9A6 602 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PREBQ9HCU5 417 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 EIF2B3Q9NR50 452 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SYBUQ9NX95 663 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SMG5Q9UPR3 1016 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 NCKAP1Q9Y2A7 1128 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 UTP11Q9Y3A2 253 aaKnown RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PCDHGA2Q9Y5H1 932 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PCYT1BQ9Y5K3 369 aaPredicted RBP7.99□□□□□ -1.13
TRIM49-202ENST00000532501 PLXND1Q9Y4D7 1925 aa7.99□□□□□ -1.13
TRIM49-202ENST00000532501 SPAG17Q6Q759 2223 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 FANCMQ8IYD8 2048 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 A0A1W2PR77 199 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 OR51F1A6NGY5 319 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 EFCAB8A8MWE9 144 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 FADS2P1A8MWK0 482 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 NEMP1O14524 444 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 PSMD3O43242 534 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 BPIP17213 487 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 TPSB2P20231 275 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 CA4P22748 312 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 XPAP23025 273 aaPredicted RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 ARNTP27540 789 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 OXTRP30559 389 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 ADCY8P40145 1251 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 TNNT3P45378 269 aaPredicted RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 DHPSP49366 369 aaPredicted RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 CCR5P51681 352 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 RPL26P61254 145 aaKnown RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 TMPRSS15P98073 1019 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 SEPT6Q14141 434 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 NAA30Q147X3 362 aaPredicted RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 TPSAB1Q15661 275 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 KHDC1Q4VXA5 237 aaKnown RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 ALS2CLQ60I27 953 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 HIBCHQ6NVY1 386 aaPredicted RBP7.98□□□□□ -1.13
TRIM49-202ENST00000532501 CEP68Q76N32 757 aa7.98□□□□□ -1.13
TRIM49-202ENST00000532501 TMC3Q7Z5M5 1100 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms