RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TLR4O00206 839 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 ARHGAP33O14559 1287 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 FPGTO14772 594 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 LZTS3O60299 673 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-206ENST00000531480 KRT14P02533 472 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 HOXC4P09017 264 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-206ENST00000531480 PSMA3P25788 255 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 ETV3P41162 512 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 PTGIRP43119 386 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 CTSKP43235 329 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 SPINT3P49223 89 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 NXPH1P58417 271 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 DCDC1P59894 354 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 YPEL5P62699 121 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 CDK16Q00536 496 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 MTM1Q13496 603 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 CCDC6Q16204 474 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 WHAMMP3Q1A5X7 153 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 TCEAL6Q6IPX3 200 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 Q6ZVL8 140 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 LINC00523Q86TU6 105 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 DCP2Q8IU60 420 aaKnown RBP14.45□□□□□ -0.1
CPSF1-206ENST00000531480 TCEAL3Q969E4 200 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 NUS1Q96E22 293 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 NUSAP1Q9BXS6 441 aaKnown RBP14.45□□□□□ -0.1
CPSF1-206ENST00000531480 ERVMER34-1Q9H9K5 563 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 AASDHPPTQ9NRN7 309 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 CDC23Q9UJX2 597 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 CA5BQ9Y2D0 317 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 ANKRD6Q9Y2G4 727 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 A0A1B0GVT2 93 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 AURKAO14965 403 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 MAGEC1O60732 1142 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 USP12O75317 370 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 ECEL1O95672 775 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 GAS8O95995 478 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SOD1P00441 154 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SYPP08247 313 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 PIRTP0C851 137 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 ENGP17813 658 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 TPSB2P20231 275 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 TNNT3P45378 269 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-206ENST00000531480 RABIFP47224 123 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 CLDN2P57739 230 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 GRIK2Q13002 908 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 PTK6Q13882 451 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SPARCL1Q14515 664 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 KCNJ11Q14654 390 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 ACOX1Q15067 660 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SF3A2Q15428 464 aaKnown RBP14.44□□□□□ -0.1
CPSF1-206ENST00000531480 TPSAB1Q15661 275 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 ZNF423Q2M1K9 1284 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 HENMT1Q5T8I9 393 aaKnown RBP14.44□□□□□ -0.1
CPSF1-206ENST00000531480 RFLNAQ6ZTI6 216 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SYDE1Q6ZW31 735 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SPATS2Q86XZ4 545 aaKnown RBP14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SLC22A18ASQ8N1D0 253 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 PELI3Q8N2H9 469 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SLC25A41Q8N5S1 370 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 PLA2G15Q8NCC3 412 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SPATA4Q8NEY3 305 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 OR13H1Q8NG92 308 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 CCHCR1Q8TD31 782 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 BRSK1Q8TDC3 778 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SKA1Q96BD8 255 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 LRRC45Q96CN5 670 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 ABCG8Q9H221 673 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 CASS4Q9NQ75 786 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 IL17CQ9P0M4 197 aa14.44□□□□□ -0.1
CPSF1-206ENST00000531480 SPTY2D1-AS1A0A0U1RR47 76 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 CDX4O14627 284 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-206ENST00000531480 PPFIA2O75334 1257 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 CFIP05156 583 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 THEGLP0DJG4 465 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 TSHRP16473 764 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 IVDP26440 423 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 INPP5AQ14642 412 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 TAF1AQ15573 450 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-206ENST00000531480 KIF19Q2TAC6 998 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 PNCKQ6P2M8 343 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 IL27RAQ6UWB1 636 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 LAYNQ6UX15 382 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 Q6ZSR6 202 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 KLHDC7BQ96G42 594 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 PLEKHG4BQ96PX9 1271 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 MYOCQ99972 504 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 APOL2Q9BQE5 337 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 TEX101Q9BY14 249 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 RAD18Q9NS91 495 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 RXFP3Q9NSD7 469 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 DNAAF2Q9NVR5 837 aaKnown RBP14.43□□□□□ -0.1
CPSF1-206ENST00000531480 PKD2L2Q9NZM6 624 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 SHOC2Q9UQ13 582 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 CABIN1Q9Y6J0 2220 aa14.43□□□□□ -0.1
CPSF1-206ENST00000531480 K7ESM1 405 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 LDB2O43679 373 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 DFNA5O60443 496 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 PYGLP06737 847 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 APRTP07741 180 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 ZNF883P0CG24 379 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms